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Table 2 Log2-fold change (6-BA vs Control at 6, 12 and 24 h) of the DEGs between RNA-seq and qPCR

From: Comparative transcriptome analysis reveals the regulatory networks of cytokinin in promoting the floral feminization in the oil plant Sapium sebiferum

Description 6 h 12 h 24 h
Gene ID Gene Name RNA-seq qPCR RNA-seq qPCR RNA-seq qPCR
CL3798.Contig10_All Shaker Pollen Inward K+ Channel 0.2 −0.4 2.1 1.7 0.1 0.6
CL15451.Contig2_All Cytochrome P450 78A9 0.6 0.3 1.1 1.6 1.1 0.9
CL14312.Contig3_All RPB15.9.9 1.4 1.9 3.5 2.6 0.1 −0.4
CL10984.Contig2_All YUCCA4 1.1 1.6 0.8 1.5 1.2 2.5
CL8402.Contig2_All Fantastic Four 3-like 1.9 2.5 1.2 0.8 2.3 1.6
CL1856.Contig26_All ATP-dependent DNA helicase 3.8 3.2 0.5 −0.3 0 0.5
CL1323.Contig24_All Polygalacturonase 2.9 2.5 −1.3 − 1.6 0.7 0.2
CL14183.Contig4_All FANCL isoform X2 0.3 0.1 −3.9 −2.6 0.2 −0.5
CL4361.Contig13_All Casein kinase I −0.2 0 −1.6 −2 0.6 0.2
CL4670.Contig3_All Ethylene Response DNA Binding Factor 4 −1.1 −2.2 −0.5 −0.1 − 2 − 1.3
CL8816.Contig1_All uncharacterized protein −0.2 0.5 −0.15 0 3.9 2.8
CL2483.Contig2_All β-1,3-galactosyltransferase 2 0.2 −0.4 0.4 −0.1 −3 −3.3
CL7852.Contig4_All Response Regulator 5 1.2 2.4 0.9 1.5 1.4 2.6
CL14906.Contig2_All Xyloglucan Endotransglycosylase −1.2 −2.3 −1.1 −0.4 − 1.4 − 1