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Table 2 Log2-fold change (6-BA vs Control at 6, 12 and 24 h) of the DEGs between RNA-seq and qPCR

From: Comparative transcriptome analysis reveals the regulatory networks of cytokinin in promoting the floral feminization in the oil plant Sapium sebiferum

Description

6 h

12 h

24 h

Gene ID

Gene Name

RNA-seq

qPCR

RNA-seq

qPCR

RNA-seq

qPCR

CL3798.Contig10_All

Shaker Pollen Inward K+ Channel

0.2

−0.4

2.1

1.7

0.1

0.6

CL15451.Contig2_All

Cytochrome P450 78A9

0.6

0.3

1.1

1.6

1.1

0.9

CL14312.Contig3_All

RPB15.9.9

1.4

1.9

3.5

2.6

0.1

−0.4

CL10984.Contig2_All

YUCCA4

1.1

1.6

0.8

1.5

1.2

2.5

CL8402.Contig2_All

Fantastic Four 3-like

1.9

2.5

1.2

0.8

2.3

1.6

CL1856.Contig26_All

ATP-dependent DNA helicase

3.8

3.2

0.5

−0.3

0

0.5

CL1323.Contig24_All

Polygalacturonase

2.9

2.5

−1.3

− 1.6

0.7

0.2

CL14183.Contig4_All

FANCL isoform X2

0.3

0.1

−3.9

−2.6

0.2

−0.5

CL4361.Contig13_All

Casein kinase I

−0.2

0

−1.6

−2

0.6

0.2

CL4670.Contig3_All

Ethylene Response DNA Binding Factor 4

−1.1

−2.2

−0.5

−0.1

− 2

− 1.3

CL8816.Contig1_All

uncharacterized protein

−0.2

0.5

−0.15

0

3.9

2.8

CL2483.Contig2_All

β-1,3-galactosyltransferase 2

0.2

−0.4

0.4

−0.1

−3

−3.3

CL7852.Contig4_All

Response Regulator 5

1.2

2.4

0.9

1.5

1.4

2.6

CL14906.Contig2_All

Xyloglucan Endotransglycosylase

−1.2

−2.3

−1.1

−0.4

− 1.4

− 1