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Table 1 Differentially expressed major flowering pathway genes in both chilled flower buds (CB) [vs nonchilled flower buds (NB)] and late-pink buds (LPB) (vs CB) in ‘Legacy’. LogFC for chilled buds: Log2(CB/NB). LogFC for late-pink buds: Log2(LPB/CB)

From: Comparative transcriptome analysis of nonchilled, chilled, and late-pink bud reveals flowering pathway genes involved in chilling-mediated flowering in blueberry

Arabidopsis_ID|Vc_transcript_ID

LogFC for chilled buds

LogFC for late-pink buds

FDR for chilled buds

FDR for late-pink buds

e-value_to_blast

Gene_name

Annotation_by_Trinotate

Query_PmDAMs

AT5G60910.1|c77424_g2_i2

1.0

2.2

6E-03

3E-19

9E-44

FUL, AGL8

AGL11_ARATH

 

AT1G69120.1|c92021_g1_i1

−0.6

−1.8

4E-02

5E-15

1E-80

AP1, AGL7

AGL8_SOLTU

 

AT5G60910.1|c88116_g1_i1

−0.4

0.8

4E-02

1E-10

5E-91

FUL, AGL8

AGL8_SOLTU

 

AT1G69120.1|c88116_g8_i1

3.2

−5.4

1E-16

2E-59

4E-94

AP1, AGL7

AGL8_SOLTU

 

AT1G69120.1|c81830_g1_i1

3.5

−2.1

2E-42

4E-24

2E-52

AP1, AGL7

AGL9_PETHY

 

AT1G69120.1|c88116_g7_i1

3.6

−2.7

3E-33

7E-41

3E-90

AP1, AGL7

AP1_SINAL

 

AT5G15840.1|c77980_g1_i1

−0.5

0.7

2E-03

3E-10

1E-66

CO, FG

COL2_ARATH

 

AT5G15840.1|c76265_g1_i1

2.3

−2.5

2E-09

6E-14

4E-30

CO, FG

COL2_ARATH

 

AT5G60910.1|c79125_g1_i1

−0.3

−1.1

4E-02

2E-13

2E-35

FUL, AGL8

DEFA_ANTMA

 

AT5G60910.1|c67980_g1_i1

3.4

−4.6

7E-46

2E-70

5E-36

FUL, AGL8

DEFA_ANTMA

 

AT5G61850.1|c96427_g2_i1

−2.4

−5.7

4E-13

4E-24

7E-102

LFY, LFY3

FLO_ANTMA

 

AT5G61850.1|c96427_g2_i2

−2.1

−6.7

2E-13

9E-31

3E-98

LFY, LFY3

FLO_ANTMA

 

AT1G65480.1|c84088_g2_i3

−0.9

−4.5

2E-02

7E-12

5E-95

FT

HD3A_ORYSJ

 

AT1G65480.1|c84088_g2_i5

1.1

−4.9

1E-03

9E-28

1E-94

FT

HD3A_ORYSJ

 

AT1G26310.1|c77146_g1_i1

4.9

−3.1

2E-57

9E-37

2E-56

CAL, AGL10

MADS6_ORYSJ

 

AT2G45660.1|c89673_g3_i1

2.6

−4.0

1E-09

3E-15

3E-53

SOC1, AGL20

SOC1_ARATH

 

AT2G45660.1|c86010_g2_i1

3.9

−4.4

1E-08

2E-09

2E-54

SOC1, AGL20

SOC1_ARATH

 

AT2G22540.1|c91377_g1_i7

1.0

−1.6

3E-02

1E-03

5E-69

SVP, AGL22

SVP_ARATH

 

AT2G22540.1|c90829_g2_i1

1.2

−1.2

1E-03

5E-04

4E-77

SVP, AGL22

SVP_ARATH

 

AT4G24540.1|c91377_g1_i7

1.0

−1.6

3E-02

1E-03

1E-39

AGL24

SVP_ARATH

 

AT5G10140.1|c77146_g1_i1

4.9

−3.1

2E-57

9E-37

2E-31

FLC, FLF, AGL25

MADS6_ORYSJ

 

AT5G10140.1|c88116_g6_i1

4.1

−1.9

5E-91

1E-26

7E-31

FLC, FLF, AGL25

SEP1_ARATH

 

AT4G18960.1|c77424_g2_i2

1.0

2.2

6E-03

3E-19

1E-72

MAF2, AGL31

AGL11_ARATH

PmDAM1

AT2G14210.1|c80388_g1_i2

3.9

3.2

4E-02

5E-09

3E-79

MAF2, AGL31

MAD23_ORYSJ

PmDAM1

AT5G60910.1|c77146_g1_i1

4.9

−3.1

2E-57

9E-37

7E-54

MAF2, AGL31

MADS6_ORYSJ

PmDAM1

AT4G22950.1|c77424_g2_i2

1.0

2.2

6E-03

3E-19

1E-42

MAF3, AGL70

AGL11_ARATH

PmDAM1

AT4G18960.1|c88293_g3_i1

4.7

−4.7

5E-21

5E-20

5E-59

MAF4

AG_TOBAC

 

AT5G15800.2|c88116_g6_i1

4.1

−1.9

5E-91

1E-26

2E-87

MAF4

SEP1_ARATH

PmDAM1

AT1G24260.2|c68983_g1_i1

2.5

0.0

3E-06

0E + 00

3E-42

MAF5, AGL68

.

 

AT5G15800.2|c81830_g1_i1

3.5

−2.1

2E-42

4E-24

3E-89

MAF5, AGL68

AGL9_PETHY

PmDAM1

  1. #N/A: No differential expression