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Table 2 Statistics of SNP discovered by RAD tag sequencing of parents and their progeny

From: Mapping QTLs for water-use efficiency reveals the potential candidate genes involved in regulating the trait in apple under drought stress

Sample

Number of detected SNPs

Number of homozygous SNPs

Homozygous rate (%)

Number of heterozygous SNPs

Heterozygous rate (%)

Honeycrisp

732,685

533,016

72.75

199,669

27.25

Qinguan

757,736

560,466

73.97

197,270

26.03

Progeny

Average

296,901

222,337

74.89

74,564

25.11

 

Maximum

609,057

450,471

 

165,776

 
 

Minimum

98,209

75,132

 

23,077

 
 

Total

100,946,295

75,594,513

 

25,351,782

 

All samples

102,436,716

76,687,995

 

25,748,721