Skip to main content

Table 2 Statistics of SNP discovered by RAD tag sequencing of parents and their progeny

From: Mapping QTLs for water-use efficiency reveals the potential candidate genes involved in regulating the trait in apple under drought stress

Sample Number of detected SNPs Number of homozygous SNPs Homozygous rate (%) Number of heterozygous SNPs Heterozygous rate (%)
Honeycrisp 732,685 533,016 72.75 199,669 27.25
Qinguan 757,736 560,466 73.97 197,270 26.03
Progeny Average 296,901 222,337 74.89 74,564 25.11
  Maximum 609,057 450,471   165,776  
  Minimum 98,209 75,132   23,077  
  Total 100,946,295 75,594,513   25,351,782  
All samples 102,436,716 76,687,995   25,748,721