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Table 1 Summary statistics of Illumina transcriptome sequencing

From: Transcriptomic analysis reveals vacuolar Na+ (K+)/H+ antiporter gene contributing to growth, development, and defense in switchgrass (Panicum virgatum L.)

 

wild-type (WT)

transgenic line (TG)

WT1

WT2

WT3

L1

L3

L8

Raw Reads

74,371,174

62,686,086

61,045,884

60,601,736

68,477,486

77,588,252

Clean Reads

72,863,350

61,435,034

59,755,422

59,183,690

67,221,546

76,144,362

Clean Bases

10.93 G

9.22 G

8.96 G

8.88 G

10.08 G

11.42 G

Error (%)

0.01

0.01

0.01

0.02

0.01

0.01

Q20 (%)

97.6

97.72

97.74

96.4

97.66

97.65

Q30 (%)

93.85

94.12

94.14

91.02

93.99

93.97

GC (%)

57.03

58.21

57.17

54.47

55.94

57.16

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BMC Plant Biology

ISSN: 1471-2229

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