Gene | Branch-site model | -lnL | 2δ(lnL) | Q Value | ω Values | Positively selected sites |
---|---|---|---|---|---|---|
atpA | Branch (Dunaliella salina) | Â | Â | Â | ||
Null | 9513.725 |  |  | ω0 = 0.026, ω1 = 1, ω2 = 1 |  | |
Alternative | 9503.900 | 19.650 | 4.28E-04 | ω0 = 0.026, ω1 = 1, ω2 = 49.199 | 259–0.994, 269–0.951, 373–0.977, 382–0.996, 426–0.969, 429–0.978, 432–0.992, 434–0.998, 450–0.952, 455–0.978 | |
atpB | Branch (Chlamydomonas sp. ICE-L) | Â | Â | Â | ||
Null | 8590.140 |  |  | ω0 = 0.023, ω1 = 1, ω2 = 1 |  | |
Alternative | 8567.141 | 45.998 | 5.43E-10 | ω0 = 0.022, ω1 = 1, ω2 = 999 | 24–1.000, 107–0.978, 109–0.999, 375–0.998, | |
Branch (Dunaliella salina) | Â | Â | Â | |||
Null | 8566.141 |  |  | ω0 = 0.021, ω1 = 1, ω2 = 1 |  | |
Alternative | 8558.602 | 15.079 | 2.37E-03 | ω0 = 0.021, ω1 = 1, ω2 = 57.824 | 112–0.975, 297–0.970, 305–0.970, 331–0.966, 371–0.977 | |
atpE | Branch (Chlorella sp. ArM0029B) | Â | Â | Â | ||
Null | 2572.548 |  |  | ω0 = 0.030, ω1 = 1, ω2 = 1 |  | |
Alternative | 2568.079 | 8.936 | 4.29E-02 | ω0 = 0.030, ω1 = 1, ω2 = 694.685 | 100–0.987 | |
petA | Branch (Chlorella sp. ArM0029B) | Â | Â | Â | ||
Null | 5724.705 |  |  | ω0 = 0.042, ω1 = 1, ω2 = 1 |  | |
Alternative | 5720.106 | 9.198 | 4.29E-02 | ω0 = 0.042, ω1 = 1, ω2 = 999 | 216–0.984, 243–0.986 | |
psaB | Branch (Chlamydomonas sp. ICE-L) | Â | Â | Â | ||
Null | 12,670.404 |  |  | ω0 = 0.015, ω1 = 1, ω2 = 1 |  | |
Alternative | 12,665.032 | 10.746 | 1.60E-02 | ω0 = 0.016, ω1 = 1, ω2 = 998.999 | 220–0.972, 356–0.985, 646–0.990 | |
psbC | Branch (Dunaliella salina) | Â | Â | Â | ||
Null | 7158.342 |  |  | ω0 = 0.019, ω1 = 1, ω2 = 1 |  | |
Alternative | 7151.779 | 13.126 | 4.47E-03 | ω0 = 0.019, ω1 = 1, ω2 = 999 | 207–0.958, 355–0.988, 360–0.980, 410–0.992 | |
rbcL | Branch (Chlamydomonas sp. ICE-L) | Â | Â | Â | ||
Null | 6852.947 |  |  | ω0 = 0.016, ω1 = 1, ω2 = 1 |  | |
Alternative | 6843.536 | 18.822 | 3.31E-04 | ω0 = 0.017, ω1 = 1, ω2 = 365.261 | 372–0.969, 450–0.999, 457–0.994 |