Table 1 Characteristics of WRKY genes in C. intermedia
From: Identification of the WRKY gene family and functional analysis of two genes in Caragana intermedia
Gene name | cDNA length | Aa | Mw (KDa) | Group | WRKY domain | Zinc finger | Arabidopsis ortholog |
|---|---|---|---|---|---|---|---|
CiWRKY2 | 2229 | 743 | 80.46 | Group I | WRKYGQK×2 | CX4CX22-23HXH | AtWRKY2 |
CiWRKY3–1 | 1383 | 461 | 50.31 | Group I | WRKYGQK×2 | CX4CX22-23HXH | AtWRKY3 |
CiWRKY3–2 | 1536 | 512 | 55.86 | Group I | WRKYGQK×2 | CX4CX22-23HXH | AtWRKY3 |
CiWRKY6–1 | 1656 | 552 | 59.97 | Group IIb | WRKYGQK | CX5CX23HXH | AtWRKY6 |
CiWRKY6–2 | 1830 | 610 | 65.56 | Group IIb | WRKYGQK | CX5CX23HXH | AtWRKY6 |
CiWRKY12 | 696 | 232 | 26.32 | Group IIc | WRKYGQK | CX4CX23HXH | AtWRKY12 |
CiWRKY15 | 1005 | 335 | 36.43 | Group IId | WRKYGQK | CX5CX23HXH | AtWRKY15 |
CiWRKY17 | 1017 | 339 | 36.59 | Group IId | WRKYGQK | CX5CX23HXH | AtWRKY17 |
CiWRKY23 | 957 | 319 | 35.71 | Group IIc | WRKYGQK | CX4CX23HXH | AtWRKY23 |
CiWRKY26 | 1722 | 574 | 63.28 | Group I | WRKYGQK×2 | CX4CX22-23HXH | AtWRKY26 |
CiWRKY28–1 | 999 | 333 | 36.98 | Group IIc | WRKYGKK | CX4CX23HXH | AtWRKY28 |
CiWRKY28–2 | 975 | 325 | 37.19 | Group IIc | WRKYGQK | CX4CX23HXH | AtWRKY28 |
CiWRKY30 | 1083 | 361 | 40.79 | Group III | WRKYGQK | CX7CX23HXC | AtWRKY30 |
CiWRKY32–1 | 1521 | 507 | 54.68 | Group I | WRKYGQK×2 | CX4CX22-23HXH | AtWRKY32 |
CiWRKY33–1 | 1614 | 538 | 59.57 | Group I | WRKYGQK×2 | CX4CX23HXH | AtWRKY33 |
CiWRKY36 | 1785 | 595 | 64.36 | Group IIb | WRKYGQK | CX5CX23HXH | AtWRKY36 |
CiWRKY40–1 | 990 | 330 | 36.78 | Group IIa | WRKYGQK | CX5CX23HXH | AtWRKY40 |
CiWRKY40–3 | 825 | 275 | 30.97 | Group IIa | WRKYGQK | CX5CX23HXH | AtWRKY40 |
CiWRKY40–4 | 897 | 299 | 33.66 | Group IIa | WRKYGQK | CX5CX23HXH | AtWRKY40 |
CiWRKY41–1 | 1083 | 361 | 41.12 | Group III | WRKYGQK | CX7CX23HXC | AtWRKY41 |
CiWRKY48 | 1155 | 385 | 42.15 | Group IIc | WRKYGQK | CX4CX23HXH | AtWRKY48 |
CiWRKY50 | 489 | 163 | 19.22 | Group IIc | WRKYGKK | CX4CX23HXH | AtWRKY50 |
CiWRKY51 | 558 | 186 | 21.55 | Group IIc | WRKYGKK | CX4CX23HXH | AtWRKY51 |
CiWRKY56 | 678 | 226 | 25.61 | Group IIc | WRKYGQK | CX4CX23HXH | AtWRKY56 |
CiWRKY57 | 834 | 278 | 30.68 | Group IIc | WRKYGQK | CX4CX23HXH | AtWRKY57 |
CiWRKY69–1 | 798 | 266 | 28.89 | Group IIe | WRKYGQK | CX5CX23HXH | AtWRKY69 |
CiWRKY70–1 | 939 | 313 | 35.24 | Group III | WRKYGQK | CX7CX23HXC | AtWRKY70 |
CiWRKY75–1 | 567 | 189 | 21.08 | Group IIc | WRKYGQK | CX4CX23HXH | AtWRKY75 |