Skip to main content

Table 1 Transcription factor binding events in the upstream regions of SAUR10-clade genes

From: Divergent regulation of Arabidopsis SAUR genes: a focus on the SAUR10-clade

  SAUR8 SAUR9 SAUR10 SAUR12 SAUR16 SAUR50 SAUR51 SAUR54
AGL15   + +   + + +  
AP1 + + + + + + +  
AP2   +   + + + +  
FHY3      +    
LFY      + +   +
PI      +   +  
PIF3       +   
PIF4    + + + +   
PIF5      + +   
PRR5 + + + + + + +  
PRR7    + + + +   
SEP3   + + + + + + +
SOC1   + +      
  1. The DHS database (http://plantdhs.org/) was searched for the occurrence of binding sites in ChIP-seq data from 26 TFs (AGL15, AP1, AP2, AP3, BES1, EIN3, ERF115, FHY3, FLC, FLM, FUS3, GL1, GL3, GTL1, LFY, PI, PIF3, PIF4, PIF5, PRR5, PRR7, SEP3, SMZ, SOC1, TOC1, WUS). 3000 bp of upstream region was used for the search. Grey shading indicates a binding site in this region
Back to article page

BMC Plant Biology

ISSN: 1471-2229

Contact us