Table 6 Three types of congruent relationship of 12 gene expression patterns obtained from qRT-PCR in 2015–2016 and RNA-Seq in 2012–2013
Type | Gene | Description |
|---|---|---|
Similar overall, but possibly advanced or delayed | Unigene024925 (SOC1/AGL20) Unigene027432 (COR47) Unigene043533 (WRKY33) | The periods of gene up- or down-regulated obviously in 2015–16 seem like to be advanced or delayed for several weeks comparing with those in 2012–13 |
Partially similar | Unigene033982 (HSP18.2) Unigene010777 (ATOSM34) Unigene017781 (LHCB4.2) Unigene005409 (LHY) Unigene003485 (TOC1) | The periods of gene highly expressed, or up- or down-regulated obviously in 2015–16 are partially similar with those in 2012–13 |
Totally different, irregular | Unigene010909 (LOS1) Unigene022263 (PAP2) Unigene034695 (PGK) Unigene033949 (APRR3) | Fluctuant and irregular expression patterns, hardly any similarity between two winters |