Skip to main content

Table 2 Overview of the de novo sequence assembly for wheat callus

From: De novo assembly and comparative analysis of the transcriptome of embryogenic callus formation in bread wheat (Triticum aestivum L.)

Length range Contigs Transcripts Unigenes
<300 9,122,919 (98.65%) 67,091 (20.26%) 49,059 (34.49%)
300–500 60,061 (0.65%) 69,816 (21.08%) 42,416 (29.82%)
500–1000 38,359 (0.41%) 75,986 (22.94%) 26,871 (18.89%)
1000–2000 18,524 (0.20%) 74,109 (22.38%) 15,378 (10.81%)
> 2000 7933 (0.09%) 44,199 (13.35%) 8497 (5.97%)
Total number 9,247,796 331,201 142,221
Total length 554,005,887 334,411,704 93,394,731
N50 length 49 1639 1001
Mean length 59.91 1009.69 656.69