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Table 2 Overview of the de novo sequence assembly for wheat callus

From: De novo assembly and comparative analysis of the transcriptome of embryogenic callus formation in bread wheat (Triticum aestivum L.)

Length range

Contigs

Transcripts

Unigenes

<300

9,122,919 (98.65%)

67,091 (20.26%)

49,059 (34.49%)

300–500

60,061 (0.65%)

69,816 (21.08%)

42,416 (29.82%)

500–1000

38,359 (0.41%)

75,986 (22.94%)

26,871 (18.89%)

1000–2000

18,524 (0.20%)

74,109 (22.38%)

15,378 (10.81%)

> 2000

7933 (0.09%)

44,199 (13.35%)

8497 (5.97%)

Total number

9,247,796

331,201

142,221

Total length

554,005,887

334,411,704

93,394,731

N50 length

49

1639

1001

Mean length

59.91

1009.69

656.69