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Table 1 Output statistics of the total reads from 6 libraries

From: De novo assembly and comparative analysis of the transcriptome of embryogenic callus formation in bread wheat (Triticum aestivum L.)

Library

Total reads (n)

Total nucleotides (bp)

Q20 percentage

GC percentage

Q30 percentage

IME3

28,775,750

5,808,494,474

100.00%

56.35%

80.18%

IME6

24,767,646

5,002,204,197

100.00%

56.47%

80.13%

IME15

25,514,989

5,153,360,463

100.00%

55.88%

80.00%

ME3

25,841,219

5,219,396,740

100.00%

56.10%

80.05%

ME6

25,745,846

5,200,136,819

100.00%

55.88%

80.20%

ME15

24,547,389

4,957,729,251

100.00%

55.73%

80.22%

  1. ME3, ME6, and ME15 are mature embryos at 3 d, 6 d, and 15 d of culture, respectively
  2. IME3, IME6, and IME15 are immature embryos at 3 d, 6 d, and 15d of culture, respectively