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Table 2 Gene ontology analysis for the top 100 upregulated genes in flax genotypes resistant to Fusarium oxysporum (Dakota, #3896, #3896 × AP5, and Dakota × AP5)

From: Differential gene expression in response to Fusarium oxysporum infection in resistant and susceptible genotypes of flax (Linum usitatissimum L.)

GO
category
Term Observed number of genes Expected number of genes p-value FDR
GO:0008137 NADH dehydrogenase (ubiquinone) activity 6 0.15 1.5E-08 1.1E-04
GO:0050136 NADH dehydrogenase (quinone) activity 6 0.15 1.5E-08 1.1E-04
GO:0003954 NADH dehydrogenase activity 6 0.17 3.3E-08 1.7E-04
GO:1,990,204 oxidoreductase complex 7 0.38 5.0E-08 1.9E-04
GO:0005747 mitochondrial respiratory chain complex I 5 0.14 1.2E-07 2.8E-04
GO:0045271 respiratory chain complex I 5 0.14 1.2E-07 2.8E-04
GO:0030964 NADH dehydrogenase complex 5 0.14 1.4E-07 2.8E-04
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 6 0.23 1.5E-07 2.8E-04
GO:0044455 mitochondrial membrane part 8 0.61 2.0E-07 3.4E-04
GO:0044429 mitochondrial part 14 2.58 4.0E-07 6.2E-04
GO:0016651 oxidoreductase activity, acting on NAD(P)H 7 0.56 1.5E-06 2.1E-03
GO:0009435 NAD biosynthetic process 3 0.04 2.8E-05 3.6E-02
GO:1,901,566 organonitrogen compound biosynthetic process 12 2.93 4.4E-05 5.3E-02
  1. Note: One gene can belong to more than one GO category. FDR – false discovery rate