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Table 1 Transcriptome assembly statistics for flax cultivars and BC2F5 populations

From: Differential gene expression in response to Fusarium oxysporum infection in resistant and susceptible genotypes of flax (Linum usitatissimum L.)

Feature АР5 TOST Dakota #3896 Dakota × АР5 #3896 × АР5 Dakota × АР5, Dakota, АР5 #3896 × АР5, #3896,АР5 All samples
Genes 52,659 52,802 52,287 55,062 51,758 52,088 72,128 73,473 89,290
Transcripts 110,764 108,737 107,255 111,051 108,107 109,009 151,218 154,343 183,905
GC-content 46 46 46 46 46 46 46 46 46
N50 1776 1804 1806 1810 1810 1831 1874 1859 1882
Median
contig length
998 1000 1010 987 1015 1032 997 987 923
Average
contig length
1212 1220 1225 1214 1228 1245 1247 1235 1216
Total
assembled
bases, Mb
134.2 132.7 131.3 134.8 132.7 135.8 188.5 190.7 223.7