From: Transcriptomic analysis of wound xylem formation in Pinus canariensis
Contig name | Oligo name | Description |  | bp | Tm | GC% | Sequence (5’-3’) |
---|---|---|---|---|---|---|---|
Contig00654 | Pc_00654_CESA_F1 | cellulose synthase a-like protein | Forward | 20 | 63.0 | 55 | GGACCACACTCCTCATTCCT |
Pc_00654_CESA_R1 | Reverse | 20 | 63.0 | 45 | ACCCCATGACTGAAATCCAT | ||
Contig12050 | Pc_12050_MYB_F1 | MYB46-like protein | Forward | 20 | 62.8 | 45 | ATTCCCAACATGGAAGAAGC |
Pc_12050_MYB_R1 | Reverse | 20 | 63.7 | 50 | CTGCATCACCATCACACTCA | ||
Contig20304 | Pc_20304_ATHB13_F1 | ATHB13-like protein | Forward | 20 | 63.2 | 50 | CCCATTCTCATGATGTCTGC |
Pc_20304_ATHB13_R1 | Reverse | 20 | 63.1 | 50 | CAGAACTGCCTTCACTTCCA | ||
Contig00787 | Pc_00787_NAC_F1 | NAC2-like prtoein | Forward | 20 | 62.5 | 45 | CTAAATGGCCCTGGGTAAAA |
Pc_00787_NAC_R1 | Reverse | 20 | 62.8 | 50 | CCCCTTCTTCTTACCAACCA | ||
Contig20555 | Pc_20555_PAL_F1 | phenylalanine ammonia-lyase-like protein | Forward | 20 | 63.1 | 50 | GAATTGACGTCCTGGTTGTG |
Pc_20555_PAL_R1 | Reverse | 20 | 62.7 | 50 | CAGCCTGGACTATGGTTTCA | ||
Contig03225 | Pc_03225_EXPANSIN_F1 | α-expansin-like protein | Forward | 20 | 62.8 | 45 | AAGCGGAGCTGATTCTTGAT |
Pc_03225_EXPANSIN_R1 | Reverse | 20 | 63.1 | 60 | CTCAGAGCCACAGAGACGAG | ||
Contig05551 | Pc_05551_WRKY_F1 | WRKY51-like protein | Forward | 20 | 62.5 | 45 | ACGCAGAGGGGAATAAGAAA |
Pc_05551_WRKY_R1 | Reverse | 20 | 63.2 | 50 | CAGAAAACGTTCACCCACAG | ||
Contig06476 | Pc_06476_CCoAOMT_F1 | CCoAOMT-like protein | Forward | 20 | 64.0 | 50 | GATTGAACAACCGAGGTGCT |
Pc_06476_CCoAOMT_R1 | Reverse | 20 | 63.6 | 45 | TGCAACACCTGAATTCCAAC | ||
Contig06813 | Pc_06813_WOX_F1 | WOX4-like protein | Forward | 20 | 63.1 | 50 | TCTCGGCTCATGTTCACTTC |
Pc_06813_WOX_R1 | Reverse | 20 | 63.1 | 50 | TACCAGTGGTTGCAGGTGTT | ||
Contig09007 | Pc_09007_EXO_F1 | exordium 2-like protein | Forward | 20 | 62.9 | 45 | TACCCGATCATGCAAGACAT |
Pc_09007_EXO_R1 | Reverse | 20 | 62.7 | 55 | GCGCCTAAATCTACCTGCTC | ||
Contig05923 | Pc_05923_bHLH_F1 | bHLH35-like protein | Forward | 20 | 63.9 | 45 | GTGCGAATAGAGGGCAAAAA |
Pc_05923_bHLH_R1 | Reverse | 20 | 64.1 | 45 | CGAAGCAGCAGATGTTTGAA | ||
Contig22185 | Pc_22185_PR_F1 | Major allergen PRU-like protein | Forward | 20 | 65.0 | 60 | GTGGAGGCAAGGAGACTGTG |
Pc_22185_PR_R1 | Reverse | 19 | 64.9 | 63.2 | CTGCCTACGCCTCCATCTC | ||
House-keeping | Ri18S_FW | 18S ribosomal | Forward | 19 | 62.4 | 53 | GCGAAAGCATTTGCCAAGG |
Ri18S_RV | Reverse | 21 | 62.4 | 48 | ATTCCTGGTCGGCATCGTTTA |