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Table 2 Primers used for qRT-PCR

From: Transcriptomic analysis of wound xylem formation in Pinus canariensis

Contig name

Oligo name

Description

 

bp

Tm

GC%

Sequence (5’-3’)

Contig00654

Pc_00654_CESA_F1

cellulose synthase a-like protein

Forward

20

63.0

55

GGACCACACTCCTCATTCCT

Pc_00654_CESA_R1

Reverse

20

63.0

45

ACCCCATGACTGAAATCCAT

Contig12050

Pc_12050_MYB_F1

MYB46-like protein

Forward

20

62.8

45

ATTCCCAACATGGAAGAAGC

Pc_12050_MYB_R1

Reverse

20

63.7

50

CTGCATCACCATCACACTCA

Contig20304

Pc_20304_ATHB13_F1

ATHB13-like protein

Forward

20

63.2

50

CCCATTCTCATGATGTCTGC

Pc_20304_ATHB13_R1

Reverse

20

63.1

50

CAGAACTGCCTTCACTTCCA

Contig00787

Pc_00787_NAC_F1

NAC2-like prtoein

Forward

20

62.5

45

CTAAATGGCCCTGGGTAAAA

Pc_00787_NAC_R1

Reverse

20

62.8

50

CCCCTTCTTCTTACCAACCA

Contig20555

Pc_20555_PAL_F1

phenylalanine ammonia-lyase-like protein

Forward

20

63.1

50

GAATTGACGTCCTGGTTGTG

Pc_20555_PAL_R1

Reverse

20

62.7

50

CAGCCTGGACTATGGTTTCA

Contig03225

Pc_03225_EXPANSIN_F1

α-expansin-like protein

Forward

20

62.8

45

AAGCGGAGCTGATTCTTGAT

Pc_03225_EXPANSIN_R1

Reverse

20

63.1

60

CTCAGAGCCACAGAGACGAG

Contig05551

Pc_05551_WRKY_F1

WRKY51-like protein

Forward

20

62.5

45

ACGCAGAGGGGAATAAGAAA

Pc_05551_WRKY_R1

Reverse

20

63.2

50

CAGAAAACGTTCACCCACAG

Contig06476

Pc_06476_CCoAOMT_F1

CCoAOMT-like protein

Forward

20

64.0

50

GATTGAACAACCGAGGTGCT

Pc_06476_CCoAOMT_R1

Reverse

20

63.6

45

TGCAACACCTGAATTCCAAC

Contig06813

Pc_06813_WOX_F1

WOX4-like protein

Forward

20

63.1

50

TCTCGGCTCATGTTCACTTC

Pc_06813_WOX_R1

Reverse

20

63.1

50

TACCAGTGGTTGCAGGTGTT

Contig09007

Pc_09007_EXO_F1

exordium 2-like protein

Forward

20

62.9

45

TACCCGATCATGCAAGACAT

Pc_09007_EXO_R1

Reverse

20

62.7

55

GCGCCTAAATCTACCTGCTC

Contig05923

Pc_05923_bHLH_F1

bHLH35-like protein

Forward

20

63.9

45

GTGCGAATAGAGGGCAAAAA

Pc_05923_bHLH_R1

Reverse

20

64.1

45

CGAAGCAGCAGATGTTTGAA

Contig22185

Pc_22185_PR_F1

Major allergen PRU-like protein

Forward

20

65.0

60

GTGGAGGCAAGGAGACTGTG

Pc_22185_PR_R1

Reverse

19

64.9

63.2

CTGCCTACGCCTCCATCTC

House-keeping

Ri18S_FW

18S ribosomal

Forward

19

62.4

53

GCGAAAGCATTTGCCAAGG

Ri18S_RV

Reverse

21

62.4

48

ATTCCTGGTCGGCATCGTTTA

  1. Tm: Melting temperature. GC%: guanine-cytosine content