Skip to main content

Table 1 Summary of genetic variation in C. microphylla populations detected in microsatellites (SSR), chloroplast DNA sequences (cpDNA), and genotyping-by-sequencing (GBS)

From: Population genetic structure is shaped by historical, geographic, and environmental factors in the leguminous shrub Caragana microphylla on the Inner Mongolia Plateau of China

Population

SSR

cpDNA

 

GBS

Na

Ho

He

Ha

Hd

π × 103

 

Ho

He

SZW

7.73

0.63

0.65

5

0.771

0.47

 

–

–

ZXB

8.00

0.61

0.67

6

0.554

0. 35

 

0.280

0.307

DL

7.41

0.58

0.64

6

0.766

0. 86

 

0.262

0.289

XH

7.55

0.65

0.66

3

0.598

0. 32

 

0.303

0.308

QYH

6.86

0.69

0.66

3

0.692

0.35

 

0.268

0.256

XU

7.18

0.46

0.58

2

0.368

0. 27

 

0.228

0.287

DU

8.09

0.68

0.71

2

0.294

0. 11

 

0.269

0.281

EWK

6.73

0.62

0.62

1

0.000

0. 00

 

0.261

0.261

CB

6.32

0.42

0.53

1

0.000

0. 00

 

0.196

0.247

XBY

5.32

0.43

0.49

1

0.000

0. 00

 

0.219

0.250

  1. Na, the average number alleles per locus; Ho, observed heterozygosity; He, expected heterozygosity; Ha, number of haplotypes; Hd, haplotype diversity; π, nucleotide diversity