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Table 1 Proteins with increased abundance in “Dongcha11” shoots newly germinated in winter compared to spring tender shoots

From: Comparative proteomics reveals the physiological differences between winter tender shoots and spring tender shoots of a novel tea (Camellia sinensis L.) cultivar evergrowing in winter

Spot No. Protein name Species Accession Ratio Mascot score MS coverage% Theoretical Mr.(kDa)/pI Expressed Mr.(kDa)/pI
Photosynthesis
 1 Ribulose 1,5-bisphosphate carboxylase Aralidium pinnatifidu AAG24624 >100 80 5 52.13/6.2 14.46/4.07
 2 Ribulose 1,5-bisphosphate carboxylase Aralidium pinnatifidu AAG24624 75.93 76 5 52.13/6.2 14.74/4.46
 3 Ribulose bisphosphate carboxylase large chain Acacia farnesiana P93998 19.9 415 12 50.86/6.2 20.22/6.00
 4 Ribulose bisphosphate carboxylase large chain Acacia farnesiana P93998 13.38 427 7 50.86/6.2 18.93/5.03
 5 Ribulose bisphosphate carboxylase large chain Akania bidwillii Q07281 5.62 126 8 52.31/6.2 29.14/6.82
 6 Ribulose bisphosphate carboxylase large chain Akania bidwillii Q07281 3.81 355 13 52.31/6.2 29.21/6.73
 7 Ribulose bisphosphate carboxylase large chain Begonia metallica X sanguinea P28383 3.02 308 15 49.17/6.6 28.32/6.43
 8 RuBisCO large subunit-binding protein subunit alpha, chlorop Brassica napus (Rape) P21239 2.09 344 8 57.71/4.7 59.74/4.07
 9 Plastocyanin Capsella bursa-pastoris P00294 2.51 65 24 10.43/4.1 14.11/3.54
 10 ATP synthase delta chain, chloroplastic Spinacia oleracea P11402 5.77 47 6 27.66/5.7 17.54/5.76
Cell structure
 11 Putative histone H3-like 5 Vitis vinifer Q9FKQ3 >100 52 14 15.64/11.9 15.19/6.22
 12 Profilin-1 Ricinus communis O82572 2.09 84 29 14.31/4.4 12.31/3.61
 13 Profilin-A Camellia sinensis Q9FUD1 2.75 71 9 14.35/4.8 12.72/3.73
 14 Histone H4 Arabidopsis thaliana P59259 >100 42 13 11.40/12.0 13.24/6.04
 15 Histone H2A.1 Triticum aestivum P02275 >100 52 8 15.58/11.1 16.08/6.49
Protein synthesis & destination
 16 Predicted protein Populus trichocarpa XP_002301464 6.5 145 9 29.47/10.0 17.32/4.19
 17 Predicted protein Populus trichocarpa XP_002301464 2.09 161 10 29.47/10.0 17.21/4.42
 18 Proteasome subunit beta type-6 Arabidopsis thaliana Q8LD27 3.89 51 6 25.19/5.2 22.22/5.23
 19 Eukaryotic initiation factor 4A-1 Oryza sativa Japonica P35683 >100 59 9 47.34/5.3 45.58/5.79
Transporters
 20 Hypothetical protein Camellia sinensis AEC10968 6.97 99 8 24.67/10.4 19.54/4.36
 21 Phosphatidylglycerol/phosphatidylinositol transfer protein p Camellia sinensis AEC10983 11.57 139 25 16.96/4.8 12.47/4.15
Disease/defense
 22 Putative In2.1 protein Triticum aestivum CAA76758 9.94 56 4 27.25/5.3 26.48/4.35
 23 Peptide methionine sulfoxide reductase Solanum lycopersicum P54153 10.56 88 7 22.25/6.1 19.72/5.61
Protein of unknown functions
 24 unknown Picea sitchensis ADE77382 3.53 91 4 37.84/5.8 32.90/4.11
  1. Only protein spots that changed in abundance at least 2-fold in at least two of three replicates are included
  2. Ratio: Protein abundance in winter shoots/ Protein abundance in spring shoots