BinName | Log2Foldchange | Rice gene annotation | |||
---|---|---|---|---|---|
Transcript ID | Cd1h | MCd1 | MCdD | Cd24h | |
Stress protein | |||||
 Os03g16020.1Ⓜ | 4.78 | 8.93 | 8.95 | 6.76 | hsp20/alpha crystallin family protein |
Abscisic acid synthesis | |||||
 Os07g05940.1△Ⓒ | 5.63 | 8.61 | 8.60 | 7.32 | 9-cis-epoxycarotenoid dioxygenase, OsNCED4 |
Jasmonate synthesis and signaling | |||||
 Os06g11290.1△Ⓒ | 5.06 | 6.25 | 5.76 | 4.72 | 12-oxophytodienoate reductase, OsOPR1 |
 Os06g11240.1 | 4.52 | 5.13 | 4.38 | 4.79 | OPR |
 Os06g11210.1# | 3.55 | 5.19 | 4.91 | 3.34 | OsOPR5 |
 Os10g25290.1#Ⓒ | 2.72 | 5.54 | 4.66 | 2.97 | ZIM domain containing protein, OsJAZ12 |
 Os03g08330.1△Ⓒ | 3.36 | 7.21 | 6.93 | 2.02 | OsJAZ10 |
 Os10g25230.1△Ⓒ | 4.89 | 7.43 | 7.38 | 4.45 | OsJAZ13 |
 Os03g08310.1* | 2.99 | 5.56 | 4.67 | 1.86 | OsJAZ9 |
 Os12g05440.1*Ⓒ | 4.09 | 6.83 | 5.28 | 4.33 | cytochrome P450, CYP94C2b |
Ethylene signal transduction | |||||
 Os08g36920.1# | 5.16 | 8.29 | 8.90 | 5.47 | AP2 domain containing protein |
 Os07g22730.1Ⓜ | 3.17 | 5.98 | 7.58 | 3.40 | AP2 domain |
 Os09g39850.1Ⓜ | 3.71 | 5.30 | 5.72 | 2.72 | AP2 domain |
 Os09g28440.1 Ⓒ | 4.67 | 7.54 | 7.97 | 6.41 | AP2 domain, OsEATB |
 Os02g43790.1△Ⓒ | 2.57 | 3.89 | 4.36 | 2.09 | ethylene-responsive transcription factor, OsBIERF3 |
 Os05g34730.1 | 4.99 | 7.43 | 8.95 | 4.88 | ethylene-responsive transcription factor, SERF1 |
Transcription factor family | |||||
 Os01g09100.1△ | 2.44 | 4.65 | 4.68 | 3.14 | OsWRKY10 |
 Os01g01870.1△ | 2.53 | 3.48 | 1.77 | 1.58 | HLH DNA-binding domain containing protein |
 Os01g49160.1△ | 1.91 | 4.07 | 3.91 | 2.11 | MYB family transcription factor |
 Os01g19330.1 Ⓒ | 4.33 | 7.48 | 7.53 | 5.03 | MYB |
 Os02g41510.1#Ⓒ | 2.96 | 4.31 | 3.82 | 3.01 | MYB |
 Os03g60080.1#Ⓒ | 3.67 | 5.08 | 5.16 | 3.48 | SNAC1 |
 Os07g12340.1Ⓜ | 4.93 | 6.26 | 5.91 | 3.04 | OsNAC3 |
 Os09g31390.1 | −1.25 | −1.46 | −2.64 | −1.64 | OsbZIP74 |
Zinc finger proteins | |||||
 Os09g21710.1#Ⓒ | 2.71 | 6.17 | 6.95 | 2.94 | AN1-like zinc finger domain containing protein |
 Os03g32230.1#Ⓒ | 5.04 | 7.77 | 6.03 | 3.61 | ZOS3–12 - C2H2 zinc finger protein |
 Os03g60560.1 Ⓒ | 7.11 | 9.63 | 11.52 | 5.82 | ZOS3–21, ZFP182 |
 Os12g39400.1△Ⓒ | 2.36 | 5.08 | 5.67 | 2.75 | ZOS12–09, ZFP252 |
 Os03g60570.1△Ⓒ | 5.12 | 9.13 | 8.86 | 5.79 | ZOS3–22 |
 Os02g45780.1△Ⓒ | 2.74 | 5.76 | 5.24 | 2.48 | zinc finger, C3HC4 type |
 Os09g29310.1△ | 3.83 | 6.05 | 5.86 | 2.33 | zinc finger, C3HC4 type |
Glutathione S transferases | |||||
 Os10g22070.1* | 2.42 | 3.04 | 3.92 | 2.07 | glutathione S-transferase, GST |
 Os09g20220.1#Ⓒ | 6.43 | 7.67 | 7.73 | 8.32 | GST |
 Os10g38340.1△Ⓒ | 6.40 | 11.52 | 13.14 | 7.08 | GSTU6 |
 Os10g38720.1Ⓜ | 2.87 | 5.78 | 7.45 | 4.64 | GST |
 Os03g57200.1 | 2.10 | 2.66 | 2.93 | 1.35 | GST |
 Os10g38314.1 | 5.71 | 7.11 | 8.28 | 5.29 | GST |
 Os10g38350.1 | 1.97 | 3.07 | 1.94 | 2.20 | GST |
ROS regulation-related genes | |||||
 Os07g08840.3 | 5.09 | 5.39 | 3.94 | 4.17 | apoplastic H-type thioredoxin, OsTRXh1 |
 Os04g33390.1* | 1.98 | 3.42 | 2.26 | 2.24 | prephenate dehydratase / arogenate dehydratase |
 Os11g42989.1* | 5.09 | 5.40 | 6.16 | 3.81 | exo70 exocyst complex subunit |
Transporters | |||||
 Os01g42380.1# | 2.07 | 4.51 | 4.56 | 4.00 | ABCG36/OsPDR9 |
 Os02g37300.1△ | 2.33 | 4.56 | 7.04 | 3.61 | HMAD |
 Os02g37330.1△ | 4.25 | 7.19 | 8.63 | 4.43 | HMAD |
 Os03g11900.1Ⓜ | 1.15 | 2.78 | 2.58 | 1.99 | monosaccharide transporter, OsMST4 |
others DEGs with Cd-upregulated homologs | |||||
 Os02g50730.1△ | 1.90 | 2.67 | 3.49 | 4.41 | APK_ORTHOMCL1642, metalloendoproteinase |
 Os06g13180.1△ | 3.03 | 1.88 | 5.44 | 5.03 | APK_ORTHOMCL1642, metalloendoproteinase |
 Os08g04350.1△ | 4.22 | 4.28 | 7.54 | 7.52 | APK_ORTHOMCL3089, plastocyanin-like |
 Os08g04360.1 | 4.76 | 4.90 | 7.71 | 8.40 | APK_ORTHOMCL3089, plastocyanin-like |
 Os08g04370.1△ | 3.04 | 3.02 | 5.56 | 4.75 | APK_ORTHOMCL3089, plastocyanin-like |
 Os12g18560.1△ | 2.53 | 3.31 | 4.95 | 4.96 | APK_ORTHOMCL14694, pectin methylesterase inhibitor |
others novel DEGs | |||||
 Os01g61990.1* | 1.42 | 1.55 | 1.15 | 1.70 | ankyrin repeat-containing protein, OsNPR4 |
 Os03g08520.1* | 2.79 | 4.38 | 5.32 | 2.02 | DUF581 domain containing protein |
 Os03g41330.1* | −1.59 | −2.77 | −3.08 | −1.97 | DUF260 domain containing protein |
 Os02g25700.1* | −1.31 | −2.17 | −3.04 | −1.23 | O-acyltransferase |
 Os03g08720.1* | −1.57 | −1.75 | −3.10 | −3.27 | transferase family protein |
 Os04g43710.1* | −1.23 | −2.12 | −2.30 | −2.63 | CAMK, Ca/CaM-depedent protein kinases |
 Os06g11030.1* | 2.13 | 4.94 | 4.84 | 2.38 | EF hand family protein |
 Os08g42490.1* | 3.47 | 4.65 | 7.06 | 3.91 | DC1 domain containing protein |
 Os12g43870.1* | 3.05 | 4.39 | 3.81 | 3.20 | expressed protein |