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Table 3 Frequency of TE insertions in the upstream regions of syntenic and non-syntenic genes

From: Maize RNA PolIV affects the expression of genes with nearby TE insertions and has a genome-wide repressive impact on transcription

 

Genes

TE_1Kb Upstream TSS

TE_-500/+500 bp TSS

SUB1

12,190

1935

15.87%

828

6.79%

SUB2

7175

1233

17.18%

557

7.76%

Non-syntenic

20,291

5170

25.48%

3095

15.25%

 

39,656

8338

21.03%

4480

11.30%

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BMC Plant Biology

ISSN: 1471-2229

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