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Table 1 Summary of differential expression analyses results

From: Maize RNA PolIV affects the expression of genes with nearby TE insertions and has a genome-wide repressive impact on transcription

 

All-test-set

All-test-set - RSEM + EBSeq

Stress-test-set

Control-test-set

Shared

rpd1/rmr6 Up-regulated

1415

3573

964

936

880

rpd1/rmr6 Down-regulated

202

393

148

148

71

  1. Number of genes resulting as differentially expressed (log2FC > |2|; FDR < 0.05) in each pairwise comparison, and shared in at least three independent comparisons
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BMC Plant Biology

ISSN: 1471-2229

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