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Table 2 Summary of sequencing results and their matches in the Oryza sativa Japonica. cv. Nipponbare genome

From: Comparative studies on tolerance of rice genotypes differing in their tolerance to moderate salt stress

Sample name

Raw reads

Clean reads

Q30%

Total mapped reads

Dongdao-4-control-Shoot-1

55,250,786

54,137,962

92.20

50,926,791

Dongdao-4-control-Shoot-2

58,323,950

57,208,312

92.66

53,987,360

Jigeng-88-control-Shoot-1

58,448,584

56,784,834

89.69

53,001,156

Jigeng-88-control-Shoot-2

54,904,288

53,432,852

90.41

49,824,285

Dongdao-4-salt-Shoot-1

51,848,598

48,385,532

89.52

50,869,413

Dongdao-4-salt-Shoot-2

57,200,640

54,379,656

90.49

44,764,519

Jigeng-88-salt-Shoot-1

62,512,034

57,515,542

90.94

54,147,061

Jigeng-88-salt-Shoot-2

58,009,966

54,798,810

89.09

51,173,210