Genome-wide transcriptome profiling provides overwintering mechanism of Agropyron mongolicum

BMC Plant Biology

Table 1 Quality metrics of Unigenes

Sample	Total Number	Total Length	Mean Length	N50	N70	N90	GC(%)
B1-1	58216	51926661	891	1465	907	353	51.78
B1-2	61352	54707935	891	1466	900	354	52.05
B1-3	57648	52116217	904	1467	921	362	51.96
B2-1	57781	48810094	844	1400	852	327	50.6
B2-2	54719	45107200	824	1366	822	319	51.27
B2-3	57956	49662741	856	1424	868	333	50.43
B3-1	67819	48701817	718	1143	662	283	51.73
B3-2	74266	54664602	736	1209	690	284	50.47
B4-1	58979	50849997	862	1445	878	334	51.74
B4-2	60744	53423598	879	1493	911	334	50.47
B4-3	61409	53566582	872	1503	904	329	50.11
All-Unigene	191204	208509575	1090	1811	1197	456	50.36

N50: a weighted median statistic that 50% of the TotalLength is contained in transcripts great than or equal to this value. GC (%): the percentage of G and C bases in all transcripts.

ISSN: 1471-2229