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Table 1 Quality metrics of Unigenes

From: Genome-wide transcriptome profiling provides overwintering mechanism of Agropyron mongolicum

Sample Total Number Total Length Mean Length N50 N70 N90 GC(%)
B1-1 58216 51926661 891 1465 907 353 51.78
B1-2 61352 54707935 891 1466 900 354 52.05
B1-3 57648 52116217 904 1467 921 362 51.96
B2-1 57781 48810094 844 1400 852 327 50.6
B2-2 54719 45107200 824 1366 822 319 51.27
B2-3 57956 49662741 856 1424 868 333 50.43
B3-1 67819 48701817 718 1143 662 283 51.73
B3-2 74266 54664602 736 1209 690 284 50.47
B4-1 58979 50849997 862 1445 878 334 51.74
B4-2 60744 53423598 879 1493 911 334 50.47
B4-3 61409 53566582 872 1503 904 329 50.11
All-Unigene 191204 208509575 1090 1811 1197 456 50.36
  1. N50: a weighted median statistic that 50% of the TotalLength is contained in transcripts great than or equal to this value. GC (%): the percentage of G and C bases in all transcripts.