Skip to main content
Fig. 7 | BMC Plant Biology

Fig. 7

From: Characterization of molecular diversity and genome-wide mapping of loci associated with resistance to stripe rust and stem rust in Ethiopian bread wheat accessions

Fig. 7

Linkage disequilibrium patterns of haplotype blocks of SNP markers significantly associated with stripe rust resistance. a On the long arm of chromosome 1B and (b) on the short arm chromosome 2A. The upper part of the graph show genetic distance (cM) from the 90 K SNP consensus map ([36]. The middle part of the graph show -log (P) values of marker-trait associations for infection types (IT) over eight environments and disease severity (DS) over six environments plotted against genetic distance (cM). The lower part of the graph shows local LD r 2 value patterns. Values within the diamonds of the triangular LD matrix are the r 2 values multiplied by 100. IT_ETH_14 = infection type (IT) Ethiopia 2014, IT_ETH_12 = IT Ethiopia 2012, IT_ETH_13 = IT Ethiopia 2013, IT_MTV_14 = IT Mount Vernon 2014, IT_MTV_13 = IT Mount Vernon 2013, IT_MTV_12 = IT Mount Vernon 2012, IT_PLM_14 = IT Pullman 2014, IT_PLM_12 = IT Pullman 2012, DS_ETH_13 = Disease severity (DS) Ethiopia 2013, DS_MTV_14 = DS Mount Vernon 2014, DS_MTV_12 = DS Mount Vernon 2012, DS_PLM_14 = DS Pullman 2014, DSPLM_12 = DS Pullman 2012, DS_PLM_13 = DS Pullman 2012

Back to article page

BMC Plant Biology

ISSN: 1471-2229

Contact us