Table 3 Tags identifying antisense sequences
From: Deep Super-SAGE transcriptomic analysis of cold acclimation in lentil (Lens culinaris Medik.)
| TAG number | TAG sequence | Fold change1 | Nucleotide sequence identity between TAG and lentil sequences2 | Lens sequences | Other legume species sequences | UniProt identification and accession number |
|---|---|---|---|---|---|---|
| AS8 |
CATGAGATTGCACTTGAGTAACTTGG ANTISENSE | 7.34 | 25-26 |
64544 647 331115122 |
502080648 2 g104400 |
Mediator of RNA polymerase II transcription subunit 15a?? Transcription cofactor, putative, G7IM96_MEDTR?? |
| AS27 |
CATGAGTTGGCGTCCAATATTTTGAA ANTISENSE | 5.67 | 25-26 |
72001 296 56138 122 331117328 |
086s0008 502127601 | ABC transporter C family member?? |
| NAS10a |
CATGTTTTTGAATTGTGATTGCTCTC ANTISENSE | 7.28 | 25 |
N107087 N6881 331108837 368545933 |
388509589 502117510 571480914 | Haloacid dehalogenase-like hydrolase, A0A072VYK9_MEDTR |
| NAT38 |
CATGATTTTCCCTCTCAAGACTAAGT ANTISENSE | 5.10 | 25-26 |
N11063 68382 215 66867 237 |
552990588 502124263 571537824 | Protein FAM135B-like protein, A0A0B2PEB3_GLYSO |
| NAT39 |
CATGGTCATAAAGGTTCTGAATAGGG ANTISENSE See AS2 and AT7 | 5.10 | 25-26 |
331108296 268537762 268541446 |
5g097280 502099852 359806052 |
Light-harvesting complex I chlorophyll A/B-binding protein, G7KEN2_MEDTR Chlorophyll a/b binding protein 215, CB215_PEA |
| N15 = T30 |
CATGATGTCGCCGACCGTAACAATAA ANTISENSE | 5.08 | 25-26 |
331109463 87696 239 64868 288 |
1g012710 1g012690 502124985 | Protease inhibitor/seed storage/LTP family protein, G7I725_MEDTR |
| A18 = T25 |
CATGGTTATAGCCTCCTCCTCCACCA ANTISENSE See A1, A22 and A35 | 5.39 | 26 |
331121144 65367 194 |
5g084570 114415397 502097761 |
Cold and drought-regulated protein CORA, G7K7D2_MEDTR Putative glycine-rich protein, Q0E7L3_PEA |
| A25 = T26 |
CATGATGATATAATCAGTTACCATTG ANTISENSE | 5.01 | 23-26 |
65697 176 331109145 | 2605888 | Dormancy-associated protein, O22612_PEA (glycine-rich protein). |
| A35 |
CATGGCCAATAGGCCAAGGATGAGGA ANTISENSE See A1, A18 and A22 | 4.04 | 26 |
C1949 331121144 331108748 |
5g084570 114415397 |
Putative glycine-rich protein, Q0E7L3_PEA Cold and drought-regulated protein CORA, CORA_MEDSA G7K7D2_MEDTR |