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Table 2 Numbers of SNPs that reside within the ABC, NLR and START genes or their neighborhoodsa

From: Prediction and analysis of three gene families related to leaf rust (Puccinia triticina) resistance in wheat (Triticum aestivum L.)

 

Seedling

Adult

WCPb

WSP

Total

WCP

WSP

Total

ABC

14 (9)c

4 (3)

18 (12)

31 (19)

12 (8)

43 (27)

NLR

21 (15)

8 (6)

29 (21)

11 (8)

3 (2)

14 (10)

START

9 (7)

3 (3)

12 (10)

9 (7)

1 (1)

10 (8)

  1. These SNPs are the markers of QTLs identified for leaf rust resistance in wheat seedlings and adult plants
  2. aNeighborhood defined as 5 Kb upstream (from 5′ transcription start site or TSS) or downstream (from 3′ transcription termination site or TTS) of a gene, see Additional file 5 for details
  3. bWCP, With known Chromosome Positions; WSP, With only Scaffold Positions
  4. cThe number of involved genes is indicated in parentheses