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Fig. 5 | BMC Plant Biology

Fig. 5

From: Integrative analysis of DNA methylation, mRNAs, and small RNAs during maize embryo dedifferentiation

Fig. 5

Association of methylation and transcriptional down-regulation at a different locus. a IGV track of the MeDIP data at the H2A locus. Green, purple: MeDIP-seq tracks of the CK and stage II embryo callus groups, respectively; red outlines the hypomethylated region of the gene of interest. b H2A methylation and expression as determined by DGE. Expression is given as the log2-fold change as calculated for embryo callus compared to normal embryo. c Association of hypermethylation and down-regulation at the chr106 and Zmet5/ Dmt105 loci. Both genes are significantly down-regulated (FDR < 0.001)

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