From: CottonFGD: an integrated functional genomics database for cotton
Database Name | Description | Available Genome Assemblies |
---|---|---|
Cotton specific databases | ||
CottonGen [10] | A genomics, genetics and breeding database for cotton research | G. raimondii (JGI & BGI) |
 | G. arboreum (BGI) | |
 | G. hirsutum (NAU & BGI) | |
GraP [11] | Platform of Functional Genomics Analysis in Gossypium raimondii | G. raimondii (JGI) |
ccNet [12] | Database of co-expression networks for diploid and polyploid Gossypium | G. arboreum (BGI) |
 | G. hirsutum (NAU) | |
General plant databases | ||
Phytozome [41] | A comparative platform for green plant genomics | G. raimondii (JGI) |
GreeNC [42] | A Wiki-database of plant lncRNAs | G. raimondii (JGI) |
PGDD [43] | Plant Genome Duplication Database | G. raimondii (JGI) |
PIECE [44] | Plant gene structure comparison and evolution database | G. raimondii (JGI) |
Planteome [45] | Plant Ontology database | G. raimondii (JGI) |
PlantTFDB [46] | Plant Transcription Factor Database | G. raimondii (JGI) |
 | G. arboreum (BGI) | |
 | G. hirsutum (NAU) | |
PLAZA [47] | An access point for plant comparative genomics | G. raimondii (JGI) |