| |
Darkening RIL seed coats
|
Non-Darkening RIL seed coats
|
|---|
|
Early
|
Intermediate
|
Mature
|
Early
|
Intermediate
|
Mature
|
|---|
|
Raw reads
|
55,936,639 (±5.9%)
|
50,956,017 (±4.4%)
|
50,662,455 (± 5.4%)
|
54,666,751 (± 7.5%)
|
52,473,537 (±6.2%)
|
54,424,625 (± 6.4%)
|
|
Trimmed reads
|
51,875,329 (±5.0%)
|
47,244,783 (± 4.4%)
|
47,241,601 (± 4.9%)
|
50,916,550 (± 7.5%)
|
48,876,790 (± 5.9%)
|
50,446,588 (± 5.4%)
|
|
Total mappings
|
50,185,242 (± 4.8%)
|
45,620,314 (± 4.5%)
|
45,831,924 (± 4.9%)
|
49,381,726 (± 7.5%)
|
47,212,581 (± 5.9%)
|
48,831,478 (± 5.2%)
|
|
Single mappings
|
49,391,395 (± 4.8%)
|
45,003,334 (± 4.5%)
|
45,174,334 (±4.8%)
|
48,592,490 (±7.5%)
|
46,573,926 (± 5.9%)
|
48,173,184 (± 5.2%)
|
|
Multi mappings
|
793,847 (± 4.1%)
|
616,980 (± 6.4%)
|
657,590 (± 7.7%)
|
789,237 (± 6.4%)
|
638,656 (±5.7%)
|
658,294 (± 5.8%)
|
|
Alignment (%)
|
95.3 (± 0.3%)
|
95.3 (± 0.2%)
|
95.7 (± 0.1%)
|
95.5 (±0.2%)
|
95.4 (± 0.2%)
|
95.6 (± 0.2%)
|
|
Transcripts
|
42,715 (±0.7%)
|
41,368 (± 0.3%)
|
41,077 (± 0.4%)
|
42,921 (±0.5%)
|
41,400 (± 0.2%)
|
40,993 (± 0.2%)
|
|
Gene counts
|
27,915
|
27,727
|
27,661
|
27,897
|
27,683
|
27,626
|
- For each RIL developmental stage, data represents the mean ± percent standard error (denoted in brackets) of three greenhouse replicates.
