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Table 3 The enrichments of families of the protein-coding genes identified by the environmental-specific lncRNA-mRNA co-expression network

From: Systematic comparison of lncRNAs with protein coding mRNAs in population expression and their response to environmental change

Family

NO.

Protein kinase domain

13

Ring finger domain

13

Cytochrome P450

12

WD domain, G-beta repeat

12

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

9

alpha/beta hydrolase fold

7

EF-hand domain pair

7

Alpha/beta hydrolase family

6

DnaJ domain

6

Protein phosphatase 2C

6

AMP-binding enzyme = Domain of unknown function (DUF4009)

5

Glutathione S-transferase, C-terminal domain = Glutathione S-transferase, N-terminal domain

5

GRAS family transcription factor

5

Myb-like DNA-binding domain

5

PPR repeat = PPR repeat family

5

Sugar (and other) transporter

5

Zinc finger, C3HC4 type (RING finger)

5