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Table 2 Average expected number of SNPs between a pair of genotypes based on Gossypium germplasm group

From: Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array

   G. hirsutum G. hirsutum, improved G. hirsutum, improved, US
Group Gossypium spp. Overall Improved Wild US Other countries Eastern Mid-south Plains Western N/A
Gossypium spp. 7167.8           
G. hirsutum overall 6866.0 6564.2          
 Improved 6408.7 6107.0 5649.7         
 Wild 7029.7 6727.9 6270.6 6891.5        
G. hirsutum, improved            
 US 6334.5 6032.7 5575.5 6196.4 5501.2       
 Other countries 6441.7 6139.9 5682.7 6303.6 5608.5 5715.7      
G. hirsutum, improved, US            
 Eastern 6154.2 5852.5 5395.2 6016.1 5321.0 5428.2 5140.7     
 Mid-south 5744.1 5442.3 4985.1 5606.0 4910.8 5018.1 4730.6 4320.4    
 Plains 6212.6 5910.9 5453.6 6074.5 5379.4 5486.6 5199.1 4789.0 5257.5   
 Western 5875.9 5574.1 5116.9 5737.8 5042.6 5149.8 4862.4 4452.2 4920.8 4584.0  
 N/A 6350.6 6048.8 5591.5 6212.5 5517.3 5624.5 5337.0 4926.9 5395.5 5058.7 5533.4
  1. Calculations were based on the average MAF (including monomorphic SNPs) for each group obtained from Table 1