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Table 3 DEGs with high FRPM values in TW-1 and TW-1-M

From: Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

Gene Gene_annotation TW-1-M TW-1 Regulation
gene13922 1-aminocyclopropane-1-carboxylate oxidase 1 1160.28 240.427 up
gene20644 1-aminocyclopropane-1-carboxylate oxidase 1-like 326.818 56.2496 up
gene20259 1-aminocyclopropane-1-carboxylate oxidase-like 446.817 204.574 up
gene2676 2-hydroxyisoflavanone dehydratase 148.017 308.306 down
gene34732 ABC transporter F family member 1, transcript variant X1 57.2258 240.966 down
gene37621 abscisic acid receptor PYL12-like 656.208 1350.98 down
gene12186 acyl-CoA oxidase 55.391 117.437 down
gene58187 ascorbate peroxidase 1, cytosolic 270.578 105.846 up
gene29377 auxin down-regulated protein 2132.82 759.573 up
gene37700 auxin-repressed 12.5 kDa protein-like, transcript variant X1 116.909 278.5 down
gene8950 catalase 62 192.975 down
gene14347 catalase 90.0193 255.074 down
gene7840 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A 236.779 110.339 up
gene54561 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A 223.879 104.715 up
gene27626 embryonic protein DC-8-like 44.7358 269.219 down
gene31117 endo-1,3-beta-glucanase 59.2309 540.571 down
gene37696 ethylene-responsive transcription factor 12 212.678 879.038 down
gene42281 ethylene-responsive transcription factor 12-like 374.843 794.408 down
gene15603 ethylene-responsive transcription factor ERF110-like 155.112 347.213 down
gene49187 ethylene-responsive transcription factor RAP2-1-like 56.2688 135.164 down
gene24409 ethylene-responsive transcription factor RAP2-3-like 668.14 1576.5 down
gene42969 ethylene-responsive transcription factor RAP2-3-like 1167.92 3510.15 down
gene35673 F-box protein SKP2B, transcript variant X1 77.6451 172.134 down
gene55554 flavonol synthase/flavanone 3-hydroxylase-like 84.0581 183.276 down
gene8335 galactinol synthase 1 500.381 1388.7 down
gene55115 galactinol synthase 2 23.0731 379.858 down
gene15912 galactinol--sucrose galactosyltransferase, transcript variant X2 142.3 396.706 down
gene11959 galactinol--sucrose galactosyltransferase-like 90.2918 344.135 down
gene42444 gibberellin 2-beta-dioxygenase-like 240.649 96.8673 up
gene52252 gibberellin-regulated protein 4-like 6582.18 2751.57 up
gene56620 glutathione S-transferase GST 18 74.9299 251.187 down
gene18908 glutathione S-transferase GST 7 223.983 96.0631 up
gene27455 glutathione S-transferase L3, transcript variant X1 158.692 512.444 down
gene44166 glutathione transferase 132.399 308.722 down
gene21642 homeodomain-leucine zipper protein 56, transcript variant X1 189.04 91.3283 up
gene46225 isoflavone 7-O-glucosyltransferase 1-like 30.5776 116.967 down
gene8972 L-ascorbate oxidase homolog 139.264 63.2909 up
gene27264 late embryogenesis abundant protein D-34-like 300.459 1242.39 down
gene35300 late embryogenesis abundant protein-like 328.87 2372.13 down
gene37327 late embryogenesis abundant protein-like 52.5198 587.359 down
gene30694 MYB transcription factor MYB50 142.722 41.363 up
gene9199 MYB transcription factor MYB68 52.8014 152.65 down
gene46117 peroxidase 12-like 192.985 80.4326 up
gene24224 peroxidase 15-like, transcript variant X1 179.556 36.2356 up
gene16824 probable aldo-keto reductase 2 42.1291 513.099 down
gene47762 probable galactinol--sucrose galactosyltransferase 6, transcript variant X1 161.157 60.6944 up
gene44169 probable glutathione S-transferase parC 86.7473 287.001 down
gene8658 putative F-box protein PP2-B12 77.8839 458.651 down
gene11905 RING-H2 finger protein ATL48 269.579 746.254 down
gene55008 stachyose synthase 57.1634 224.996 down
gene27675 transcription elongation factor 1 homolog 129.432 322.136 down
gene12634 transcription factor HEC1-like 80.3 168.632 down
gene30355 UDP-glucose 4-epimerase GEPI48-like, transcript variant X1 48.3533 148.505 down
gene52306 UDP-glucose 6-dehydrogenase 1 172.346 65.6367 up
gene22682 UDP-glucose dehydrogenase, transcript variant X1 181.645 84.1597 up
gene54704 UDP-glycosyltransferase 73C2-like 392.204 114.358 up
gene45 zinc finger CCCH domain-containing protein 20 97.306 265.596 down