Skip to main content

Table 2 Up-regulated genes

From: Transcriptomic comparison between two Vitis vinifera L. varieties (Trincadeira and Touriga Nacional) in abiotic stress conditions

Variety/Treatment

Name

Log2

ID

Annotation

TR_W

VviEXLB4

7.24

VIT_200s1455g00010

expansin-like b1

TR_W

lEaP a

5.02

VIT_205s0020g00840

late embryogenesis abundant protein d-29-like

TR_W

VviMYBC2-L4

4.02

VIT_217s0000g02650

transcription repressor MYB4-like

TR_W

HSP20

4.39

VIT_209s0002g06790

hsp20-like chaperone

TR_W

FMT

4.21

VIT_210s0003g00480

flavonoid o-methyltransferase related

TR_L

OST1

3.63

VIT_202s0236g00130

serine threonine-protein kinase

TR_L

ProOx a

3.55

VIT_214s0083g00520

proline dehydrogenase

TR_L

CXE a

3.52

VIT_208s0032g00700

probable carboxylesterase 15

TR_L

ZFC

3.19

VIT_216s0098g00360

zinc finger protein constans-like protein

TR_L

ELIP1

2.96

VIT_205s0020g04110

early light-inducible protein

TR_H

HSP21

5.56

VIT_216s0098g01060

chloroplast low molecular weight heat shock protein

TR_H

mHSP23

4.73

VIT_202s0154g00490

mitochondrial small heat shock protein

TR_H

GolS1

4.64

VIT_207s0005g01980

galactinol synthase

TR_H

HSP18

4.47

VIT_213s0019g03000

18.1 kDa class i heat shock protein HSP18

TR_H

HSP20

4.39

VIT_209s0002g06790

hsp20-like chaperone

FTR

PPP a

4.90

XM_010667183

pentatricopeptide repeat-containing protein

FTR

PDI a

4.43

VIT_201s0127g00560

probable nucleoredoxin 1-like

FTR

HSP17II

4.01

VIT_204s0008g01590

17.3 kDa class ii heat shock protein

FTR

HSP20

3.99

VIT_209s0002g06790

hsp20-like chaperone

FTR

cHSP21

5.56

VIT_216s0098g01060

chloroplast low molecular weight heat shock protein

TN_W

E12A11

1.82

VIT_200s0203g00080

protein mother of ft and tf 1

TN_W

LEA

1.81

VIT_203s0038g04390

late embryogenesis abundant

TN_W

HAI1_HAI3

1.78

VIT_206s0004g05460

protein phosphatase 2c

TN_W

Lipase a

1.32

XM_002265963

GDSL esterase/lipase

TN_L

PRP-I a

3.09

VIT_202s0154g00320

14 kDa proline-rich protein

TN_L

NitTrans a

2.61

VIT_217s0000g09470

nitrate transmembrane transporter

TN_L

PRP-II a

1.89

VIT_202s0154g00300

14 kDa proline-rich protein

TN_L

GLP4

1.86

VIT_217s0000g05360

rhicadhesin receptor

TN_L

GA2OX8

1.79

VIT_210s0116g00410

gibberellin 20-oxidase

TN_H

CML44

3.31

XM_002285850

probable calcium-binding protein CML44

TN_H

ELIP1

2.96

VIT_205s0020g04110

early light-inducible protein

TN_H

GolS1

2.64

VIT_207s0005g01980

galactinol synthase

TN_H

DnaJ a

2.52

VIT_214s0060g01490

heat shock protein binding

TN_H

ProKin a

2.19

VIT_218s0166g00010

probable LRR receptor-like serine/threonine-protein kinase

FTN

PRP1 a

3.58

VIT_211s0052g01650

pathogenesis-related protein

FTN

BGLU17

4.48

VIT_213s0064g01660

beta-glucosidase 13-like

FTN

FTSH6

3.76

VIT_214s0108g00590

cell division protease ftsh-6

FTN

CoCHA a

3.66

VIT_203s0038g02110

chaperone protein dnaj chloroplastic-like

FTN

Ankyrin a

3.62

VIT_205s0029g01410

ankyrin repeat-containing protein

  1. a Genes whose short name was attributed by the authors to facilitate writing. The five most up-regulated genes in Trincadeira (TR) and Touriga Nacional (TN) individual stress treatments (IS): Water deficit (W); High light (L); Heat (H); and Field: Trincadeira (FTR), Touriga Nacional (FTN). Name, expression value (in log2 gene expression, ID from 12x_v2.1 (http://genomes.cribi.unipd.it/grape/) or NCBI accession. Genes highlighted in bold represent genes that are shared between treatments and genes highlighted in underline represent genes shared between varieties, in Table 2 and between Table 2 and 3
Back to article page

BMC Plant Biology

ISSN: 1471-2229

Contact us