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Table 2 Glycolytic enzymes differentially expressed in avocado in response to flooding

From: Transcriptome responses of an ungrafted Phytophthora root rot tolerant avocado (Persea americana) rootstock to flooding and Phytophthora cinnamomi

Name Annotation E-value FI vs C F vs C
FC 22 h FC 48 h FC 22 h FC 48 h
Pa_Contig00049 PREDICTED: Vitis vinifera hexokinase-1-like (LOC100242358). mRNA 0 3.06 3.93 3.47 4.38
Pa_Contig00073 PREDICTED: Nelumbo nucifera pyruvate kinase, cytosolic isozyme (LOC104591283), transcript variant X4, mRNA 0 2.18 2.22 1.99 2.19
Pa_Contig00092 PREDICTED: Nelumbo nucifera pyruvate kinase, cytosolic isozyme-like (LOC104612526), mRNA 0 2.67 2.44 2.31 1.98
Pa_Contig00101 PREDICTED: Elaeis guineensis 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (LOC105046041), mRNA 0 2.35 1.65 2.05 1.77
Pa_Contig00105 PREDICTED: Nelumbo nucifera pyruvate kinase, cytosolic isozyme (LOC104610148), transcript variant X5, mRNA 0 −2.35 −3.31 −2.77 −3.21
Pa_Contig00106 PREDICTED: Nelumbo nucifera pyruvate kinase, cytosolic isozyme-like (LOC104612526), mRNA 0 4.71 4.78 3.73 4.85
Pa_Contig00124 Magnolia liliiflora GADPH mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase 0 6.4 5.54 5.61 5.38
Pa_Contig00281 PREDICTED: Elaeis guineensis phosphoglycerate kinase, cytosolic (LOC105059872), transcript variant X2, mRNA 0 3.6 3.41 2.99 3.04
Pa_Contig00331 Persea americana mRNA for fructose-bisphosphate aldolase (alf gene) 1e-175 2.66 3.00 3.22 2.90
Pa_Contig00355 Persea americana mRNA for fructose-bisphosphate aldolase (alf gene) 0 −1.6 −2.12 −1.56 −2.17
Pa_Contig00366 PREDICTED: Phoenix dactylifera ATP-dependent 6-phosphofructokinase 3-like (LOC103714334), mRNA 0 9.36 9.81 9.27 10.47
Pa_Contig00411 PREDICTED: Vitis vinifera pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha (LOC100249662), mRNA 0 21.82 13.02 19.66 13.00
Pa_Contig00493 PREDICTED: Nelumbo nucifera glucose-6-phosphate isomerase, cytosolic (LOC104595713), mRNA 0 3.45 2.51 2.87 2.32
Pa_Contig00650 Actinidia eriantha fructokinase mRNA, complete cds 0 5.40 8.92 5.79 8.86
Pa_Contig00959 PREDICTED: Nelumbo nucifera triosephosphate isomerase, cytosolic (LOC104602457), mRNA 0 −1.87 −2.75 −2.29 −2.69
Pa_Contig01066 M.liliiflora GADPH mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase 0 3.12 2.35 2.44 1.91
Pa_Contig01152 PREDICTED: Nelumbo nucifera triosephosphate isomerase, cytosolic (LOC104602457), mRNA 0 5.38 7.28 5.20 6.76
Pa_Contig01301 PREDICTED: Nelumbo nucifera triosephosphate isomerase, chloroplastic-like (LOC104605564), transcript variant X3, misc_RNA 0 −1.62 −1.87 −1.62 −2.01
Pa_Contig01521 PREDICTED: Nelumbo nucifera NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (LOC104603324), mRNA 0 3.37 3.14 2.93 2.37
Pa_Contig01833 PREDICTED: Nelumbo nucifera probable fructokinase-1 (LOC104605215), mRNA 1e-150 −1.98 −1.86 −1.73 −2.19
Pa_Contig02126 PREDICTED: Phoenix dactylifera pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (LOC103718504), mRNA 3e-117 −1.86 −2.65 −1.74 −2.89
Pa_Contig02161 PREDICTED: Vitis vinifera pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (LOC100256839), mRNA 0 −1.39 −2.36 −1.48 −2.04
Pa_Contig02414 PREDICTED: Malus domestica hexokinase-1-like (LOC103449780), mRNA 2e-146 ns 2.16   −1.67
Pa_Contig02512 58 % coverage 3e-56 20.27 11.41 18.3 11.48
Pa_Contig02723 PREDICTED: Nelumbo nucifera NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like (LOC104610711), mRNA 0 2.94 2.89 2.83 2.57
Pa_Contig03335 PREDICTED: Amborella trichopoda enolase (LOC18441538), mRNA 4e-137 5.30 3.98 3.88 3.74
Pa_Contig03561 PREDICTED: Nelumbo nucifera glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like (LOC104611012), mRNA 3e-75 2.25 2.33 2.24 2.24
Pa_Contig04410 PREDICTED: Phoenix dactylifera glucose-6-phosphate isomerase, cytosolic (LOC103702710), transcript variant X1, mRNA60 % coverage 1e-67 5.11 3.50 3.83 3.54
Pa_Contig04576 Annona cherimola enolase mRNA, complete cds 6e-78 3.83 3.82 3.16 3.65
Pa_Contig05176 PREDICTED: Vitis vinifera phosphoglycerate mutase (LOC100245371), mRNA 1e-125 −1.53 −1.57 −1.62 −1.59
Pa_Contig06531 PREDICTED: Camelina sativa glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic (LOC104772375), mRNA 1e-54 3.22 2.52 2.32 2.17
Pa_Contig07171 PREDICTED: Nicotiana sylvestris glucose-6-phosphate isomerase, cytosolic (LOC104225311), transcript variant X3, mRNA 2e-14 3.80 3.31 3.16 2.68
Pa_Contig07301 PREDICTED: Phoenix dactylifera glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like (LOC103696512), mRNA 140 bp 5e-41 −2.38 −1.62 −2.62 −1.75
  1. Adj. P-value <0.05, log2fold change >1 or < -1 in at least one comparison