Comparative transcript profiling of alloplasmic male-sterile lines revealed altered gene expression related to pollen development in rice (Oryza sativa L.)

Hu, Jihong; Chen, Guanglong; Zhang, Hongyuan; Qian, Qian; Ding, Yi

doi:10.1186/s12870-016-0864-7

Table 2 Down-regulated genes in both three sporophytic and four gametophytic CMS lines compared with their maintainer lines

From: Comparative transcript profiling of alloplasmic male-sterile lines revealed altered gene expression related to pollen development in rice (Oryza sativa L.)

RGAP_ID	Annotation	XQZ-A/MB	ZS97-A/MB	D62-A/MB	CW_UN	W11_UN	LD_UN	BT_UN^a
LOC_Os05g34700	GDSL-like lipase/acylhydrolase	−1.788	−1.863	−2.880	−1.248	−0.032	−2.767	−1.916
LOC_Os08g34210	aldehyde dehydrogenase	−1.465	−1.634	−2.162	−1.967	−0.009	−2.933	−2.633
LOC_Os12g12170	cytochrome b5-like Heme/Steroid	−1.569	−1.795	−2.366	−2.666	0.128	−3.665	−3.488
LOC_Os01g07560	receptor-like protein kinase 2 precursor	−2.441	−2.921	−3.254	−1.628	0.020	−6.419	−5.625
LOC_Os02g48730	rho GDP-dissociation inhibitor 1	−1.161	−1.433	−1.687	−0.912	0.215	−1.631	−1.846
LOC_Os03g14010	glycosyl hydrolase family 10 protein	−1.748	−2.064	−2.538	−2.496	−0.866	−1.624	−2.753
LOC_Os06g48170	glycosyl hydrolases family 16	−1.098	−1.348	−1.576	−1.896	−0.906	−2.381	−1.907
LOC_Os06g49760	invertase/pectin methylesterase inhibitor	−1.232	−1.755	−2.007	−1.332	0.187	−1.885	−1.748
LOC_Os12g13930	3-oxoacyl-reductase	−4.391	−3.624	−4.626	−1.837	−0.111	−6.379	−5.131
LOC_Os09g36860	acyl carrier protein	−1.250	−1.209	−1.485	−1.811	−0.567	−2.923	−2.586
LOC_Os06g40550	ABC-2 type transporter	−3.262	−3.257	−3.347	−2.983	−0.543	−9.950	−7.678
LOC_Os04g45960	OsSub42 - Putative Subtilisin	−5.103	−4.710	−5.378	−2.310	−0.430	−8.942	−9.165
LOC_Os06g12330	amino acid transporter	−2.746	−2.574	−3.035	−4.736	−0.043	−5.436	−5.730
LOC_Os04g48210	cytochrome P450	−4.450	−4.365	−4.178	−2.146	−0.027	−11.565	−10.364
LOC_Os03g08790	aspartic proteinase nepenthesin	−1.534	−1.483	−1.476	−2.025	−0.313	−9.300	−9.180
LOC_Os03g07140	male sterility protein	−3.090	−2.931	−4.804	−1.524	−0.169	−2.822	−2.552
LOC_Os07g37090	ribosome inactivating protein	−3.422	−4.056	−4.848	−3.277	0.688	−10.619	−9.790
LOC_Os02g02820	TDR	−1.918	−2.015	−2.442	−0.676	−0.459	−0.759	−0.686

^aThe microarray data of GSE18057 (Fujii et al., [2])

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ISSN: 1471-2229

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