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Table 2 Details of conserved miRNA families in pomegranate

From: Genome-wide identification of microRNAs in pomegranate (Punica granatum L.) by high-throughput sequencing

miRNA family

Counts

Sequence

miRBase database

miR157

4015427

TTGACAGAAGATAGAGAGCAC

ath-miR157a

miR156

1632172

TGACAGAAGAGAGTGAGCAC

csi-miR156

miR166

454425

TCGGACCAGGCTTCATTCCCC

pvu-miR166a

miR168

299953

TCGCTTGGTGCAGGTCGGGAA

ath-miR168a-5p

miR167

159932

TGAAGCTGCCAGCATGATCTGA

ccl-miR167a

miR535

104111

TGACAACGAGAGAGAGCACGC

ppt-miR535a

miR169

84700

TGAGCCAAGAATGACTTGCCGG

cme-miR169t

miR390

33324

AAGCTCAGGAGGGATAGCGCC

ath-miR390a-5p

miR479

19760

CGTGATGTTGGTTCGGCTCATC

ghr-miR479

miR171

10381

CGAGCCGAATCAATATCACTC

csi-miR171b

miR2916

8924

GGGGCTCGAAGACGATCAGATA

peu-miR2916

miR482

4825

TTCCCAAGGCCGCCCATTCCGA

mdm-miR482a-3p

miR160

4710

GCGTATGAGGAGCCATGCATA

ptc-miR160b-3p

miR4414

4472

TGTGAATGATGCGGGAGATAC

mtr-miR4414b

miR159

4088

TTTGGATTGAAGGGAGCTCTA

ptc-miR159a

miR164

2755

TGGAGAAGCAGGGCACGTGCA

ptc-miR164a

miR6300

2507

GTCGTTGTAGTATAGTGGT

gma-miR6300

miR319

2113

TAGCTGCCGACTCATTCATCCA

ppe-miR319b

miR894

1830

GTTCGTTTCACGTCGGGTTCACCA

ppt-miR894

miR408

1620

CTGGGAACAGGCAGGGCATGG

ptc-miR408-5p

miR172

1608

AGAATCTTGATGATGCTGCAT

ptc-miR172a

miR162

1581

TCGATAAACCTCTGCATCCAG

ptc-miR162a

miR396

1566

GCTCAAGAAAGCTGTGGGAAA

ath-miR396b-3p

miR3639

1389

AAATGACTTCTGAACGGCAAAAC

vvi-miR3639-5p

miR6248

792

TAATTGTGGATGGAGGTAT

osa-miR6248

miR1171

721

TGGGAATGGAGTGGAGTGGAGTAG

cre-miR1171

miR858

658

TTCGTTGTCTGTTCGACCTTG

ath-miR858b

miR5653

533

TGAGAGTTGAGTTGAGTTGAGTTT

ath-miR5653

miR530

513

TGCATTTGCACCTGCACCTTA

ptc-miR530a

miR4415

511

AAGGTTGTGATTGGAATTAATGGC

gma-miR4415b-5p