Table 6 Transcription factors co-up-regulated by salt stress at different time in A.sinensis calli
Gene ID | Annotation | TF family | Log2 ratio | |
|---|---|---|---|---|
24Â h vs control | 120Â h vs control | |||
Unigene18058_All | Ethylene-responsive transcription factor | AP2/ERF | 6.12 | 4.33 |
Unigene14856_All | Ethylene-responsive transcription factor ERF109-like | AP2/ERF | 4.24 | 2.55 |
Unigene7108_All | Ethylene-responsive transcription factor ERF109 | AP2/ERF | 4.18 | 2.50 |
Unigene4181_All | AP2 domain-containing transcription factor | AP2/ERF | 3.96 | 3.67 |
Unigene29855_All | AP2 domain class transcription factor | AP2/ERF | 3.91 | 5.33 |
Unigene21646_All | Ethylene-responsive transcription factor ABR1 | AP2/ERF | 3.06 | 2.40 |
Unigene18948_All | Ethylene-responsive transcription factor 1B | AP2/ERF | 3.15 | 1.25 |
CL248.Contig1_All | Ethylene-responsive transcription factor RAP2-7 | AP2/ERF | 2.82 | 1.90 |
Unigene17032_All | Ethylene-responsive transcription factor 5 | AP2/ERF | 2.35 | 1.51 |
Unigene6220_All | dehydration-responsive element binding protein 2 (DREB2) | AP2/ERF | 1.98 | 1.72 |
Unigene381_All | Ethylene-responsive transcription factor ABR1 | AP2/ERF | 1.93 | 2.14 |
Unigene8092_All | AP2/ERF domain-containing transcription factor | AP2/ERF | 1.84 | 1.95 |
Unigene20214_All | ethylene-responsive element binding protein 1 | AP2/ERF | 1.66 | 1.25 |
Unigene14338_All | AP2/EREBP transcription factor | AP2/ERF | 1.47 | 1.46 |
Unigene25279_All | AP2/ERF domain-containing transcription factor | AP2/ERF | 1.40 | 1.90 |
Unigene9921_All | MYB superfamily protein 1 | MYB | 5.95 | 4.32 |
Unigene11776_All | Transcription factor MYB75 | MYB | 5.73 | 3.60 |
Unigene14868_All | Transcription factor MYB39 | MYB | 5.43 | 3.08 |
Unigene26918_All | Putative MYB family transcription factor | MYB | 5.27 | 3.86 |
CL3573.Contig1_All | MYB-related protein MYB4 | MYB | 5.25 | 4.09 |
Unigene28480_All | MYB-related protein 78 | MYB | 5.09 | 2.99 |
Unigene13545_All | Putative MYB family transcription factor | MYB | 4.96 | 2.16 |
CL5989.Contig1_All | Transcription factor MYB21 | MYB | 4.71 | 2.93 |
Unigene5251_All | MYB-related protein | MYB | 4.14 | 3.10 |
CL5340.Contig1_All | Putative MYB family transcription factor | MYB | 3.81 | 2.79 |
CL4273.Contig2_All | MYB-related protein | MYB | 2.92 | 3.11 |
CL277.Contig1_All | MYB superfamily proteins | MYB | 2.08 | 4.09 |
Unigene23227_All | myb-related protein | MYB | 2.74 | 1.95 |
Unigene10979_All | Transcription factor MYB21 | MYB | 2.37 | 1.24 |
Unigene5227_All | myb-related protein 306-like | MYB | 1.78 | 1.21 |
CL8451.Contig1_All | MYB transcription factor R3 type | MYB | 1.58 | 1.33 |
Unigene38347_All | WRKY transcription factor 22-like | WRKY | 4.79 | 3.01 |
CL9188.Contig2_All | WRKY29-1 transcription factor | WRKY | 4.75 | 3.66 |
Unigene2832_All | Transcription factor WRKY40 | WRKY | 4.56 | 4.60 |
Unigene29386_All | WRKY transcription factor 28 | WRKY | 3.57 | 2.40 |
Unigene27408_All | WRKY transcription factor 23 | WRKY | 3.07 | 1.46 |
Unigene1977_All | WRKY transcription factor 15 | WRKY | 2.85 | 1.82 |
Unigene26943_All | WRKY transcription factor 23 | WRKY | 2.82 | 1.94 |
Unigene4489_All | WRKY transcription factor 47 | WRKY | 2.58 | 3.19 |
CL1269.Contig1_All | WRKY transcription factor 33 | WRKY | 2.38 | 2.26 |
Unigene7236_All | WRKY transcription factor 75 | WRKY | 2.20 | 4.03 |
Unigene23162_All | Probable WRKY transcription factor 14 | WRKY | 1.99 | 1.88 |
Unigene27807_All | WRKY transcription factor | WRKY | 1.88 | 2.40 |
Unigene20429_All | WRKY transcription factor 17 | WRKY | 1.82 | 1.18 |
Unigene15555_All | WRKY transcription factor 6 | WRKY | 1.63 | 1.89 |
Unigene25162_All | WRKY transcription factor 11 | WRKY | 1.60 | 1.28 |
Unigene11168_All | WRKY transcription factor 65 | WRKY | 1.28 | 1.77 |
Unigene14452_All | WRKY transcription factor 28 | WRKY | 1.26 | 1.22 |
CL8216.Contig1_All | Transcription factor bHLH122 | bHLH | 2.49 | 1.28 |
CL1535.Contig1_All | transcription factor bHLH123 | bHLH | 1.79 | 1.14 |
Unigene29356_All | transcription factor bHLH30-like | bHLH | 1.75 | 1.80 |
Unigene19013_All | Transcription factor bHLH130 | bHLH | 1.43 | 1.39 |
Unigene25168_All | Homeobox-leucine zipper protein HOX11 | HOX | 6.31 | 5.99 |
Unigene11236_All | homeobox-leucine zipper protein HOX6-like | HOX | 4.89 | 1.89 |
Unigene15687_All | Homeobox-leucine zipper protein HOX27 | HOX | 1.85 | 1.51 |
Unigene35957_All | homeobox-leucine zipper protein HAT14-like | HOX | 1.74 | 1.71 |
Unigene27798_All | NAC domain protein NAC4 | NAC | 6.41 | 4.04 |
Unigene24899_All | NAC transcription factor NAM-2 | NAC | 4.51 | 1.86 |
CL6345.Contig1_All | NAC domain-containing protein 68 | NAC | 2.00 | 1.35 |
Unigene14392_All | NAC domain-containing protein 18 | NAC | 1.88 | 1.37 |
Unigene26036_All | NAC domain protein NAC2 | NAC | 1.39 | 1.17 |
CL598.Contig8_All | Heat stress transcription factor | HSF | 4.92 | 5.77 |
Unigene13160_All | heat stress transcription factor A-4a | HSF | 2.20 | 1.45 |
CL2103.Contig2_All | Heat stress transcription factor B-2a | HSF | 1.95 | 1.25 |
Unigene10292_All | Heat stress transcription factor B-2a-like | HSF | 1.59 | 1.10 |