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Table 4 The number of differentially expressed genes involved in in the hormone signal transduction pathways

From: Salinity stress induces the production of 2-(2-phenylethyl)chromones and regulates novel classes of responsive genes involved in signal transduction in Aquilaria sinensis calli

Family, group, or pathway Number of unigenes
Total DEGs Induced-24 h Induced-120 h Co-regulated unigenes
  Up-unigenes Down-unigenes Up-unigenes Down-uigenes  
Abscisic acid 53 19 24 16 19 25
Abscisic acid receptor PYR/PYL family 4 1 2 2 1 2
Protein phosphatase 2C 41 16 17 13 13 18
ABA responsive element binding factor 8 2 5 1 5 5
Cytokinine 79 16 48 2 51 38
Arabidopsis histidine kinase 2/3/4(CRE1) 38 0 35 0 34 31
Histidine-containing phosphotransfer protein (AHP) 2 0 2 0 0 0
Two-component response regulator ARR-B family 34 16 9 2 13 6
Two-component response regulator ARR-A family 5 0 2 0 4 1
Auxin 75 16 47 9 39 41
Auxin influx carrier 7 1 6 1 6 7
Auxin-responsive protein IAA 18 5 12 2 11 11
Transport inhibitor response 1 1 0 1 0 1 0
Auxin response factor(ARF) 31 0 25 0 19 13
Auxin responsive GH3 gene family 6 3 2 3 2 4
SAUR family protein 12 7 4 3 4 6
Brassinoteroid 61 31 23 27 13 31
Protein brassinosteroid insensitive 2(BIN2) 1 1 0 0 0 0
Brassinosteroid resistant 1/2 4 0 4 0 4 4
Xyloglucan:xyloglucosyl transferase TCH4 5 4 1 1 0 0
Cyclin D3 5 5 0 4 0 3
BR-signaling kinase 3 1 2 0 0 0
Brassinosteroid insensitive1-associated receptor kinase 1 41 19 15 21 8 22
Serine/threonine-protein kinase BRI1 2 1 1 1 1 2
Jasmonic acid 36 19 12 7 11 13
Coronatine-insensitive protein 1 1 0 1 0 1 1
Jasmonate ZIM domain-containing protein(JAZ) 9 5 2 4 2 3
Transcription factor MYC2 26 14 9 3 8 9
Salicylic acid 22 15 5 7 3 8
Transcription factor TGA 14 9 5 2 1 3
Pathogenesis-related protein 1 8 6 0 5 2 5
Ethylene 37 10 24 2 13 12
Serine/threonine-protein kinase CTR1 25 1 22 0 11 9
Ethylene-insensitive protein 3 3 1 1 1 1 2
EIN3-binding F-box protein 9 8 1 1 1 1
Gibberellin 33 14 10 8 10 9
Gibberellin receptor GID1 9 6 2 4 1 4
DELLA protein 21 8 6 4 6 3
F-box protein GID2 3 0 2 0 3 2