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Table 3 Classification of transcript produced in sorghum leaves under well-watered (WW) and drought stress (DS) conditions

From: Drought stress tolerance strategies revealed by RNA-Seq in two sorghum genotypes with contrasting WUE

Genotype

Treatment

Total Mapped Reads

Match to known transcripts

Intergenic transcripts

Novel Transcripts

Alternative Splicing Events

IS20351

WW

75 %

73 %

18 %

9 %

24178

DS

74 %

71 %

20 %

9 %

24367

IS22330

WW

75 %

72 %

18 %

10 %

20498

DS

76 %

72 %

18 %

10 %

24304

  1. Percentage of total mapped reads on the reference genome, percentage of match with known transcripts, with intergenic transcripts and novel transcripts identified, and alternative splicing events identified