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Table 1 Distribution of small RNA reads among different categories in the sRNA library after dark, Blue light or UV-A treatment of Brassica rapa subsup. rapa cv. Tsuda

From: Exploring miRNAs involved in blue/UV-A light response in Brassica rapa reveals special regulatory mode during seedling development

Category Dark treatment Blue light treatment UV-A light treatment
Unique sRNAs Percent (%) Total sRNAs Percent (%) Unique sRNAs Percent (%) Total sRNAs Percent (%) Unique sRNAs Percent (%) Total sRNAs Percent (%)
Total 359,531 100 % 13,319,035 100 % 337,524 100% 12,727,958 100 % 298,261 100 % 1,105,3984 100 %
exon_
antisense
7952 2.21 % 151,963 1.14 % 7847 2.32% 117,444 0.92 % 7742 2.60 % 167,459 1.51 %
exon_
sense
7916 2.20 % 94,268 0.71 % 7545 2.24% 100,660 0.79 % 7259 2.43 % 79,121 0.72 %
intron_
antisense
12,312 3.42 % 183,025 1.37 % 11,345 3.36% 148,510 1.17 % 9167 3.07 % 146,973 1.33 %
intron_
sense
19,413 5.40 % 274,427 2.06 % 17,941 5.32% 250,571 1.97 % 13,782 4.62 % 183,113 1.66 %
miRNA 2,349 0.65 % 7,033,801 52.81 % 2,365 0.70% 5,365,249 42.15 % 2,395 0.80 % 4,042,699 36.57 %
rRNA 20,611 5.73 % 1,235,211 9.27 % 22,614 6.70% 864,612 6.79 % 35,121 11.78 % 1,412,822 12.78 %
snRNA 311 0.09 % 2,640 0.02 % 383 0.11% 3,134 0.02 % 394 0.13 % 3,668 0.03 %
snoRNA 189 0.05 % 1546 0.01 % 457 0.14% 7999 0.06 % 324 0.11 % 3431 0.03 %
tRNA 5715 1.59 % 1,137,537 8.54 % 10,857 3.22% 2,791,679 21.93 % 11,743 3.94 % 1,945,982 17.60 %
unann 282,763 78.65 % 3,204,617 24.06 % 256,170 75.90% 3,078,100 24.18 % 210,334 70.52 % 3,068,716 27.76 %