TY - JOUR AU - Walker, J. C. PY - 1994 DA - 1994// TI - Structure and function of the receptor-like protein kinases of higher plants JO - Plant Mol Biol VL - 26 UR - https://doi.org/10.1007/BF00016492 DO - 10.1007/BF00016492 ID - Walker1994 ER - TY - JOUR AU - Afzal, A. J. AU - Wood, A. J. AU - Lightfoot, D. A. PY - 2008 DA - 2008// TI - Plant receptor-like serine threonine kinases: roles in signaling and plant defense JO - Mol Plant Microbe In VL - 21 UR - https://doi.org/10.1094/MPMI-21-5-0507 DO - 10.1094/MPMI-21-5-0507 ID - Afzal2008 ER - TY - JOUR AU - Gish, L. A. AU - Clark, S. E. PY - 2011 DA - 2011// TI - The RLK/Pelle family of kinases JO - Plant J VL - 66 UR - https://doi.org/10.1111/j.1365-313X.2011.04518.x DO - 10.1111/j.1365-313X.2011.04518.x ID - Gish2011 ER - TY - JOUR AU - Johnson, K. L. AU - Ingram, G. C. PY - 2005 DA - 2005// TI - Sending the right signals: regulating receptor kinase activity JO - Curr Opin Plant Biol VL - 8 UR - https://doi.org/10.1016/j.pbi.2005.09.007 DO - 10.1016/j.pbi.2005.09.007 ID - Johnson2005 ER - TY - JOUR AU - Walker, J. C. AU - Zhang, R. PY - 1990 DA - 1990// TI - Relationship of a putative receptor protein kinase from maize to the S-locus glycoproteins of Brassica JO - Nature VL - 345 UR - https://doi.org/10.1038/345743a0 DO - 10.1038/345743a0 ID - Walker1990 ER - TY - JOUR AU - Braun, D. M. AU - Walker, J. C. PY - 1996 DA - 1996// TI - Plant transmembrane receptors: new pieces in the signaling puzzle JO - Trends Biochem Sci VL - 21 UR - https://doi.org/10.1016/S0968-0004(96)80185-X DO - 10.1016/S0968-0004(96)80185-X ID - Braun1996 ER - TY - JOUR AU - Torii, K. U. PY - 2008 DA - 2008// TI - Transmembrane receptors in plants: receptor kinases and their ligands JO - Annu Plant Rev VL - 33 ID - Torii2008 ER - TY - JOUR AU - Shiu, S. H. AU - Bleecker, A. B. PY - 2001 DA - 2001// TI - Plant receptor-like kinase gene family: diversity, function, and signaling JO - Sci STKE VL - 2001 ID - Shiu2001 ER - TY - JOUR AU - Shiu, S. H. AU - Bleecker, A. B. PY - 2001 DA - 2001// TI - Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases JO - Proc Natl Acad Sci U S A VL - 98 UR - https://doi.org/10.1073/pnas.181141598 DO - 10.1073/pnas.181141598 ID - Shiu2001 ER - TY - JOUR AU - Zhang, X. R. PY - 1998 DA - 1998// TI - Leucine-rich repeat receptor-like kinases in plants JO - Plant Mol Biol Rep VL - 16 UR - https://doi.org/10.1023/A:1007540610933 DO - 10.1023/A:1007540610933 ID - Zhang1998 ER - TY - JOUR AU - Dievart, A. AU - Clark, S. E. PY - 2004 DA - 2004// TI - LRR-containing receptors regulating plant development and defense JO - Development VL - 131 UR - https://doi.org/10.1242/dev.00998 DO - 10.1242/dev.00998 ID - Dievart2004 ER - TY - CHAP AU - Butenko, M. A. AU - Aalen, R. B. ED - Tax, F. ED - Kemmerling, B. PY - 2012 DA - 2012// TI - Receptor ligands in development BT - Receptor-like kinases in plants: from development to defense PB - Springer CY - Berlin UR - https://doi.org/10.1007/978-3-642-23044-8_11 DO - 10.1007/978-3-642-23044-8_11 ID - Butenko2012 ER - TY - JOUR AU - Albrecht, C. AU - Russinova, E. AU - Hecht, V. AU - Baaijens, E. AU - Vries, S. PY - 2005 DA - 2005// TI - The Arabidopsis thaliana SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASES 1 and 2 control male sporogenesis JO - Plant Cell VL - 17 UR - https://doi.org/10.1105/tpc.105.036814 DO - 10.1105/tpc.105.036814 ID - Albrecht2005 ER - TY - JOUR AU - Colcombet, J. AU - Boisson-Dernier, A. AU - Ros-Palau, R. AU - Vera, C. E. AU - Schroeder, J. I. PY - 2005 DA - 2005// TI - Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASES 1 and 2 are essential for tapetum development and microspore maturation JO - Plant Cell VL - 17 UR - https://doi.org/10.1105/tpc.105.036731 DO - 10.1105/tpc.105.036731 ID - Colcombet2005 ER - TY - JOUR AU - Escobar-Restrepo, J. M. AU - Huck, N. AU - Kessler, S. AU - Gagliardini, V. AU - Gheyselinck, J. AU - Yang, W. C. PY - 2007 DA - 2007// TI - The FERONIA receptor-like kinase mediates male–female interactions during pollen tube reception JO - Science VL - 317 UR - https://doi.org/10.1126/science.1143562 DO - 10.1126/science.1143562 ID - Escobar-Restrepo2007 ER - TY - JOUR AU - Hord, C. L. H. AU - Chen, C. B. AU - DeYoung, B. J. AU - Clark, S. E. AU - Ma, H. PY - 2006 DA - 2006// TI - The BAM1/BAM2 receptor-like kinases are important regulators of Arabidopsis early anther development JO - Plant Cell VL - 18 UR - https://doi.org/10.1105/tpc.105.036871 DO - 10.1105/tpc.105.036871 ID - Hord2006 ER - TY - JOUR AU - Mizuno, S. AU - Osakabe, Y. AU - Maruyama, K. AU - Ito, T. AU - Osakabe, K. AU - Sato, T. PY - 2007 DA - 2007// TI - Receptor-like protein kinase 2 (RPK 2) is a novel factor controlling anther development in Arabidopsis thaliana JO - Plant J VL - 50 UR - https://doi.org/10.1111/j.1365-313X.2007.03083.x DO - 10.1111/j.1365-313X.2007.03083.x ID - Mizuno2007 ER - TY - JOUR AU - Zhao, D. Z. AU - Wang, G. F. AU - Speal, B. AU - Ma, H. PY - 2002 DA - 2002// TI - The EXCESS MICROSPOROCYTES 1 gene encodes a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in the Arabidopsis anther JO - Gene Dev VL - 16 UR - https://doi.org/10.1101/gad.997902 DO - 10.1101/gad.997902 ID - Zhao2002 ER - TY - JOUR AU - Kinoshita, A. AU - Betsuyaku, S. AU - Osakabe, Y. AU - Mizuno, S. AU - Nagawa, S. AU - Stahl, Y. PY - 2010 DA - 2010// TI - RPK2 is an essential receptor-like kinase that transmits the CLV3 signal in Arabidopsis JO - Development VL - 137 UR - https://doi.org/10.1242/dev.048199 DO - 10.1242/dev.048199 ID - Kinoshita2010 ER - TY - JOUR AU - Muller, R. AU - Bleckmann, A. AU - Simon, R. PY - 2008 DA - 2008// TI - The receptor kinase CORYNE of Arabidopsis transmits the stem cell-limiting signal CLAVATA3 independently of CLAVATA1 JO - Plant Cell VL - 20 UR - https://doi.org/10.1105/tpc.107.057547 DO - 10.1105/tpc.107.057547 ID - Muller2008 ER - TY - JOUR AU - He, K. AU - Gou, X. P. AU - Yuan, T. AU - Lin, H. H. AU - Asami, T. AU - Yoshida, S. PY - 2007 DA - 2007// TI - BAK1 and BKK1 regulate brassinosteroid-dependent growth and brassinosteroid independent cell-death pathways JO - Curr Biol VL - 17 UR - https://doi.org/10.1016/j.cub.2007.05.036 DO - 10.1016/j.cub.2007.05.036 ID - He2007 ER - TY - JOUR AU - Nam, K. H. AU - Li, J. M. PY - 2002 DA - 2002// TI - BRI1/BAK1, a receptor kinase pair mediating brassinosteroid signaling JO - Cell VL - 110 UR - https://doi.org/10.1016/S0092-8674(02)00814-0 DO - 10.1016/S0092-8674(02)00814-0 ID - Nam2002 ER - TY - JOUR AU - Osakabe, Y. AU - Maruyama, K. AU - Seki, M. AU - Satou, M. AU - Shinozaki, K. AU - Yamaguchi-Shinozaki, K. PY - 2005 DA - 2005// TI - Leucine-rich repeat receptor-like kinase 1 is a key membrane-bound regulator of abscisic acid early signaling in Arabidopsis JO - Plant Cell VL - 17 UR - https://doi.org/10.1105/tpc.104.027474 DO - 10.1105/tpc.104.027474 ID - Osakabe2005 ER - TY - JOUR AU - Torii, K. U. AU - Mitsukawa, N. AU - Oosumi, T. AU - Matsuura, Y. AU - Yokoyama, R. AU - Whittier, R. F. PY - 1996 DA - 1996// TI - The Arabidopsis ERECTA gene encodes a putative receptor protein kinase with extracellular leucine-rich repeats JO - Plant Cell VL - 8 UR - https://doi.org/10.1105/tpc.8.4.735 DO - 10.1105/tpc.8.4.735 ID - Torii1996 ER - TY - JOUR AU - Godiard, L. AU - Sauviac, L. AU - Torii, K. U. AU - Grenon, O. AU - Mangin, B. AU - Grimsley, N. H. PY - 2003 DA - 2003// TI - ERECTA, an LRR receptor-like kinase protein controlling development pleiotropically affects resistance to bacterial wilt JO - Plant J VL - 36 UR - https://doi.org/10.1046/j.1365-313X.2003.01877.x DO - 10.1046/j.1365-313X.2003.01877.x ID - Godiard2003 ER - TY - JOUR AU - Dievart, A. AU - Gilbert, N. AU - Droc, G. AU - Attard, A. AU - Gourgues, M. AU - Guiderdoni, E. PY - 2011 DA - 2011// TI - Leucine-rich repeat receptor kinases are sporadically distributed in eukaryotic genomes JO - BMC Evol Biol VL - 11 UR - https://doi.org/10.1186/1471-2148-11-367 DO - 10.1186/1471-2148-11-367 ID - Dievart2011 ER - TY - JOUR AU - Sun, X. L. AU - Wang, G. L. PY - 2011 DA - 2011// TI - Genome-wide identification, characterization and phylogenetic analysis of the rice LRR-kinases JO - PLoS ONE VL - 6 UR - https://doi.org/10.1371/journal.pone.0016079 DO - 10.1371/journal.pone.0016079 ID - Sun2011 ER - TY - JOUR AU - Zan, Y. J. AU - Ji, Y. AU - Zhang, Y. AU - Yang, S. H. AU - Song, Y. J. AU - Wang, J. H. PY - 2013 DA - 2013// TI - Genome-wide identification, characterization and expression analysis of populus leucine-rich repeat receptor-like protein kinase genes JO - BMC Genomics VL - 14 UR - https://doi.org/10.1186/1471-2164-14-318 DO - 10.1186/1471-2164-14-318 ID - Zan2013 ER - TY - JOUR AU - Shiu, S. H. AU - Bleecker, A. B. PY - 2003 DA - 2003// TI - Expansion of the receptor-like kinase/Pelle gene family and receptor-like proteins in Arabidopsis JO - Plant Physiol VL - 132 UR - https://doi.org/10.1104/pp.103.021964 DO - 10.1104/pp.103.021964 ID - Shiu2003 ER - TY - JOUR AU - Shiu, S. H. AU - Karlowski, W. M. AU - Pan, R. S. AU - Tzeng, Y. H. AU - Mayer, K. F. X. AU - Li, W. H. PY - 2004 DA - 2004// TI - Comparative analysis of the receptor-like kinase family in Arabidopsis and rice JO - Plant Cell VL - 16 UR - https://doi.org/10.1105/tpc.020834 DO - 10.1105/tpc.020834 ID - Shiu2004 ER - TY - JOUR AU - Hartman, G. L. AU - West, E. D. AU - Herman, T. K. PY - 2011 DA - 2011// TI - Crops that feed the world 2. Soybean-worldwide production, use, and constraints caused by pathogens and pests JO - Food Secur VL - 3 UR - https://doi.org/10.1007/s12571-010-0108-x DO - 10.1007/s12571-010-0108-x ID - Hartman2011 ER - TY - JOUR AU - Schmutz, J. AU - Cannon, S. B. AU - Schlueter, J. AU - Ma, J. X. AU - Mitros, T. AU - Nelson, W. PY - 2010 DA - 2010// TI - Genome sequence of the palaeopolyploid soybean JO - Nature VL - 463 UR - https://doi.org/10.1038/nature08670 DO - 10.1038/nature08670 ID - Schmutz2010 ER - TY - JOUR AU - Kim, K. D. AU - Shin, J. H. AU - Van, K. AU - Kim, D. H. AU - Lee, S. H. PY - 2009 DA - 2009// TI - Dynamic rearrangements determine genome organization and useful traits in soybean JO - Plant Physiol VL - 151 UR - https://doi.org/10.1104/pp.109.141739 DO - 10.1104/pp.109.141739 ID - Kim2009 ER - TY - JOUR AU - Kim, S. AU - Kim, S. J. AU - Shin, Y. J. AU - Kang, J. H. AU - Kim, M. R. AU - Nam, K. PY - 2009 DA - 2009// TI - An atypical soybean leucine-rich repeat receptor-like kinase, GmLRK1, may be involved in the regulation of cell elongation JO - Planta VL - 229 UR - https://doi.org/10.1007/s00425-008-0873-3 DO - 10.1007/s00425-008-0873-3 ID - Kim2009 ER - TY - JOUR AU - Li, X. P. AU - Gan, R. AU - Li, P. L. AU - Ma, Y. Y. AU - Zhang, L. W. AU - Zhang, R. PY - 2006 DA - 2006// TI - Identification and functional characterization of a leucine-rich repeat receptor-like kinase gene that is involved in regulation of soybean leaf senescence JO - Plant Mol Biol VL - 61 UR - https://doi.org/10.1007/s11103-006-0052-5 DO - 10.1007/s11103-006-0052-5 ID - Li2006 ER - TY - JOUR AU - Yang, L. AU - Wu, K. C. AU - Gao, P. AU - Liu, X. J. AU - Li, G. P. AU - Wu, Z. J. PY - 2014 DA - 2014// TI - GsLRPK, a novel cold-activated leucine-rich repeat receptor-like protein kinase from Glycine soja, is a positive regulator to cold stress tolerance JO - Plant Sci VL - 215 UR - https://doi.org/10.1016/j.plantsci.2013.10.009 DO - 10.1016/j.plantsci.2013.10.009 ID - Yang2014 ER - TY - JOUR AU - Kaul, S. AU - Koo, H. L. AU - Jenkins, J. AU - Rizzo, M. AU - Rooney, T. AU - Tallon, L. J. PY - 2000 DA - 2000// TI - Analysis of the genome sequence of the flowering plant Arabidopsis thaliana JO - Nature VL - 408 UR - https://doi.org/10.1038/35048692 DO - 10.1038/35048692 ID - Kaul2000 ER - TY - JOUR AU - Mainali, H. R. AU - Chapman, P. AU - Dhaubhadel, S. PY - 2014 DA - 2014// TI - Genome-wide analysis of Cyclophilin gene family in soybean (Glycine max) JO - BMC Plant Biol VL - 14 UR - https://doi.org/10.1186/s12870-014-0282-7 DO - 10.1186/s12870-014-0282-7 ID - Mainali2014 ER - TY - JOUR AU - Wang, X. B. AU - Zhang, H. W. AU - Gao, Y. L. AU - Sun, G. L. AU - Zhang, W. M. AU - Qiu, L. J. PY - 2014 DA - 2014// TI - A comprehensive analysis of the Cupin gene family in soybean (Glycine max) JO - PLoS ONE VL - 9 UR - https://doi.org/10.1371/journal.pone.0110092 DO - 10.1371/journal.pone.0110092 ID - Wang2014 ER - TY - JOUR AU - Agusti, J. AU - Lichtenberger, R. AU - Schwarz, M. AU - Nehlin, L. AU - Greb, T. PY - 2011 DA - 2011// TI - Characterization of transcriptome remodeling during cambium formation identifies MOL1 and RUL1 as opposing regulators of secondary growth JO - PLoS Genet VL - 7 UR - https://doi.org/10.1371/journal.pgen.1001312 DO - 10.1371/journal.pgen.1001312 ID - Agusti2011 ER - TY - JOUR AU - Asai, T. AU - Tena, G. AU - Plotnikova, J. AU - Willmann, M. R. AU - Chiu, W. L. AU - Gomez-Gomez, L. PY - 2002 DA - 2002// TI - MAP kinase signalling cascade in Arabidopsis innate immunity JO - Nature VL - 415 UR - https://doi.org/10.1038/415977a DO - 10.1038/415977a ID - Asai2002 ER - TY - JOUR AU - Fontes, E. P. B. AU - Santos, A. A. AU - Luz, D. F. AU - Waclawovsky, A. J. AU - Chory, J. PY - 2004 DA - 2004// TI - The geminivirus nuclear shuttle protein is a virulence factor that suppresses transmembrane receptor kinase activity JO - Gene Dev VL - 18 UR - https://doi.org/10.1101/gad.1245904 DO - 10.1101/gad.1245904 ID - Fontes2004 ER - TY - JOUR AU - Chinchilla, D. AU - Zipfel, C. AU - Robatzek, S. AU - Kemmerling, B. AU - Nurnberger, T. AU - Jones, J. D. G. PY - 2007 DA - 2007// TI - A flagellin-induced complex of the receptor FLS2 and BAK1 initiates plant defence JO - Nature VL - 448 UR - https://doi.org/10.1038/nature05999 DO - 10.1038/nature05999 ID - Chinchilla2007 ER - TY - JOUR AU - Dolan, L. PY - 2006 DA - 2006// TI - Positional information and mobile transcriptional regulators determine cell pattern in the Arabidopsis root epidermis JO - J Exp Bot VL - 57 UR - https://doi.org/10.1093/jxb/erj037 DO - 10.1093/jxb/erj037 ID - Dolan2006 ER - TY - JOUR AU - Eyuboglu, B. AU - Pfister, K. AU - Haberer, G. AU - Chevalier, D. AU - Fuchs, A. AU - Mayer, K. F. X. PY - 2007 DA - 2007// TI - Molecular characterisation of the STRUBBELIG-RECEPTOR FAMILY of genes encoding putative leucine-rich repeat receptor-like kinases in Arabidopsis thaliana JO - BMC Plant Biol VL - 7 UR - https://doi.org/10.1186/1471-2229-7-16 DO - 10.1186/1471-2229-7-16 ID - Eyuboglu2007 ER - TY - JOUR AU - Kinoshita, T. AU - Cano-Delgado, A. C. AU - Seto, H. AU - Hiranuma, S. AU - Fujioka, S. AU - Yoshida, S. PY - 2005 DA - 2005// TI - Binding of brassinosteroids to the extracellular domain of plant receptor kinase BRI1 JO - Nature VL - 433 UR - https://doi.org/10.1038/nature03227 DO - 10.1038/nature03227 ID - Kinoshita2005 ER - TY - JOUR AU - DeYoung, B. J. AU - Bickle, K. L. AU - Schrage, K. J. AU - Muskett, P. AU - Patel, K. AU - Clark, S. E. PY - 2006 DA - 2006// TI - The CLAVATA1-related BAM1, BAM2 and BAM3 receptor kinase-like proteins are required for meristem function in Arabidopsis JO - Plant J VL - 45 UR - https://doi.org/10.1111/j.1365-313X.2005.02592.x DO - 10.1111/j.1365-313X.2005.02592.x ID - DeYoung2006 ER - TY - JOUR AU - Etchells, J. P. AU - Turner, S. R. PY - 2010 DA - 2010// TI - The PXY-CLE41 receptor ligand pair defines a multifunctional pathway that controls the rate and orientation of vascular cell division JO - Development VL - 137 UR - https://doi.org/10.1242/dev.044941 DO - 10.1242/dev.044941 ID - Etchells2010 ER - TY - JOUR AU - Fisher, K. AU - Turner, S. PY - 2007 DA - 2007// TI - PXY, a receptor-like kinase essential for maintaining polarity during plant vascular-tissue development JO - Curr Biol VL - 17 UR - https://doi.org/10.1016/j.cub.2007.05.049 DO - 10.1016/j.cub.2007.05.049 ID - Fisher2007 ER - TY - JOUR AU - Yamaguchi, Y. AU - Huffaker, A. AU - Bryan, A. C. AU - Tax, F. E. AU - Ryan, C. A. PY - 2010 DA - 2010// TI - PEPR2 is a second receptor for the Pep1 and Pep2 peptides and contributes to defense responses in Arabidopsis JO - Plant Cell VL - 22 UR - https://doi.org/10.1105/tpc.109.068874 DO - 10.1105/tpc.109.068874 ID - Yamaguchi2010 ER - TY - JOUR AU - Xu, S. L. AU - Rahman, A. AU - Baskin, T. I. AU - Kieber, J. J. PY - 2008 DA - 2008// TI - Two leucine-rich repeat receptor kinases mediate signaling, linking cell wall biosynthesis and ACC synthase in Arabidopsis JO - Plant Cell VL - 20 UR - https://doi.org/10.1105/tpc.108.063354 DO - 10.1105/tpc.108.063354 ID - Xu2008 ER - TY - JOUR AU - Uchida, N. AU - Shimada, M. AU - Tasaka, M. PY - 2013 DA - 2013// TI - ERECTA-family receptor kinases regulate stem cell homeostasis via buffering its cytokinin responsiveness in the shoot apical meristem JO - Plant Cell Physiol VL - 54 UR - https://doi.org/10.1093/pcp/pcs109 DO - 10.1093/pcp/pcs109 ID - Uchida2013 ER - TY - JOUR AU - Xu, G. X. AU - Guo, C. C. AU - Shan, H. Y. AU - Kong, H. Z. PY - 2012 DA - 2012// TI - Divergence of duplicate genes in exon-intron structure JO - Proc Natl Acad Sci U S A VL - 109 UR - https://doi.org/10.1073/pnas.1109047109 DO - 10.1073/pnas.1109047109 ID - Xu2012 ER - TY - JOUR AU - Moore, R. C. AU - Purugganan, M. D. PY - 2003 DA - 2003// TI - The early stages of duplicate gene evolution JO - Proc Natl Acad Sci U S A VL - 100 UR - https://doi.org/10.1073/pnas.2535513100 DO - 10.1073/pnas.2535513100 ID - Moore2003 ER - TY - JOUR AU - Leister, D. PY - 2004 DA - 2004// TI - Tandem and segmental gene duplication and recombination in the evolution of plant disease resistance genes JO - Trends Genet VL - 20 UR - https://doi.org/10.1016/j.tig.2004.01.007 DO - 10.1016/j.tig.2004.01.007 ID - Leister2004 ER - TY - JOUR AU - Yu, J. AU - Wang, J. AU - Lin, W. AU - Li, S. G. AU - Li, H. AU - Zhou, J. PY - 2005 DA - 2005// TI - The genomes of Oryza sativa: a history of duplications JO - PLoS Biol VL - 3 UR - https://doi.org/10.1371/journal.pbio.0030038 DO - 10.1371/journal.pbio.0030038 ID - Yu2005 ER - TY - JOUR AU - Blanc, G. AU - Wolfe, K. H. PY - 2004 DA - 2004// TI - Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution JO - Plant Cell VL - 16 UR - https://doi.org/10.1105/tpc.021410 DO - 10.1105/tpc.021410 ID - Blanc2004 ER - TY - JOUR AU - Yim, W. C. AU - Lee, B. M. AU - Jang, C. S. PY - 2009 DA - 2009// TI - Expression diversity and evolutionary dynamics of rice duplicate genes JO - Mol Genet Genomics VL - 281 UR - https://doi.org/10.1007/s00438-009-0425-y DO - 10.1007/s00438-009-0425-y ID - Yim2009 ER - TY - JOUR AU - Lam, H. M. AU - Xu, X. AU - Liu, X. AU - Chen, W. B. AU - Yang, G. H. AU - Wong, F. L. PY - 2010 DA - 2010// TI - Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection JO - Nat Genet VL - 42 UR - https://doi.org/10.1038/ng.715 DO - 10.1038/ng.715 ID - Lam2010 ER - TY - JOUR AU - Li, Y. H. AU - Zhao, S. C. AU - Ma, J. X. AU - Li, D. AU - Yan, L. AU - Li, J. PY - 2013 DA - 2013// TI - Molecular footprints of domestication and improvement in soybean revealed by whole genome re-sequencing JO - BMC Genomics VL - 14 UR - https://doi.org/10.1186/1471-2164-14-579 DO - 10.1186/1471-2164-14-579 ID - Li2013 ER - TY - JOUR AU - Funatsuki, H. AU - Ishimoto, M. AU - Tsuji, H. AU - Kawaguchi, K. AU - Hajika, M. AU - Fujino, K. PY - 2006 DA - 2006// TI - Simple sequence repeat markers linked to a major QTL controlling pod shattering in soybean JO - Plant Breed VL - 125 UR - https://doi.org/10.1111/j.1439-0523.2006.01199.x DO - 10.1111/j.1439-0523.2006.01199.x ID - Funatsuki2006 ER - TY - JOUR AU - Zhang, D. AU - Cheng, H. AU - Wang, H. AU - Zhang, H. Y. AU - Liu, C. Y. AU - Yu, D. Y. PY - 2010 DA - 2010// TI - Identification of genomic regions determining flower and pod numbers development in soybean (Glycine max L.) JO - J Genet Genomics VL - 37 UR - https://doi.org/10.1016/S1673-8527(09)60074-6 DO - 10.1016/S1673-8527(09)60074-6 ID - Zhang2010 ER - TY - JOUR AU - Liu, B. AU - Fujita, T. AU - Yan, Z. H. AU - Sakamoto, S. AU - Xu, D. AU - Abe, J. PY - 2007 DA - 2007// TI - QTL mapping of domestication-related traits in soybean (Glycine max) JO - Ann Bot VL - 100 UR - https://doi.org/10.1093/aob/mcm149 DO - 10.1093/aob/mcm149 ID - Liu2007 ER - TY - JOUR AU - Yang, K. AU - Jeong, N. AU - Moon, J. K. AU - Lee, Y. H. AU - Lee, S. H. AU - Kim, H. M. PY - 2010 DA - 2010// TI - Genetic analysis of genes controlling natural variation of seed coat and flower colors in soybean JO - J Hered VL - 101 UR - https://doi.org/10.1093/jhered/esq078 DO - 10.1093/jhered/esq078 ID - Yang2010 ER - TY - JOUR AU - Li, Y. H. AU - Guan, R. X. AU - Liu, Z. X. AU - Ma, Y. S. AU - Wang, L. X. AU - Li, L. H. PY - 2008 DA - 2008// TI - Genetic structure and diversity of cultivated soybean (Glycine max (L.) Merr.) landraces in China JO - Theor Appl Genet VL - 117 UR - https://doi.org/10.1007/s00122-008-0825-0 DO - 10.1007/s00122-008-0825-0 ID - Li2008 ER - TY - JOUR AU - Gou, X. P. AU - He, K. AU - Yang, H. AU - Yuan, T. AU - Lin, H. H. AU - Clouse, S. D. PY - 2010 DA - 2010// TI - Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana JO - BMC Genomics VL - 11 UR - https://doi.org/10.1186/1471-2164-11-19 DO - 10.1186/1471-2164-11-19 ID - Gou2010 ER - TY - JOUR AU - Goodstein, D. M. AU - Shu, S. Q. AU - Howson, R. AU - Neupane, R. AU - Hayes, R. D. AU - Fazo, J. PY - 2012 DA - 2012// TI - Phytozome: a comparative platform for green plant genomics JO - Nucleic Acids Res VL - 40 UR - https://doi.org/10.1093/nar/gkr944 DO - 10.1093/nar/gkr944 ID - Goodstein2012 ER - TY - JOUR AU - Hall, T. A. PY - 1999 DA - 1999// TI - BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT JO - Nucl Acids Symp Ser VL - 41 ID - Hall1999 ER - TY - JOUR AU - Letunic, I. AU - Doerks, T. AU - Bork, P. PY - 2015 DA - 2015// TI - SMART: recent updates, new developments and status in 2015 JO - Nucleic Acids Res VL - 43 UR - https://doi.org/10.1093/nar/gku949 DO - 10.1093/nar/gku949 ID - Letunic2015 ER - TY - JOUR AU - Finn, R. D. AU - Bateman, A. AU - Clements, J. AU - Coggill, P. AU - Eberhardt, R. Y. AU - Eddy, S. R. PY - 2014 DA - 2014// TI - Pfam: the protein families database JO - Nucleic Acids Res VL - 42 UR - https://doi.org/10.1093/nar/gkt1223 DO - 10.1093/nar/gkt1223 ID - Finn2014 ER - TY - JOUR AU - Thompson, J. D. AU - Gibson, T. J. AU - Plewniak, F. AU - Jeanmougin, F. AU - Higgins, D. G. PY - 1997 DA - 1997// TI - The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools JO - Nucleic Acids Res VL - 25 UR - https://doi.org/10.1093/nar/25.24.4876 DO - 10.1093/nar/25.24.4876 ID - Thompson1997 ER - TY - JOUR AU - Tamura, K. AU - Stecher, G. AU - Peterson, D. AU - Filipski, A. AU - Kumar, S. PY - 2013 DA - 2013// TI - MEGA6: molecular evolutionary genetics analysis version 6.0 JO - Mol Biol Evol VL - 30 UR - https://doi.org/10.1093/molbev/mst197 DO - 10.1093/molbev/mst197 ID - Tamura2013 ER - TY - JOUR AU - Hu, B. AU - Jin, J. P. AU - Guo, A. Y. AU - Zhang, H. AU - Luo, J. C. AU - Gao, G. PY - 2015 DA - 2015// TI - GSDS 2.0: an upgraded gene feature visualization server JO - Bioinformatics VL - 31 UR - https://doi.org/10.1093/bioinformatics/btu817 DO - 10.1093/bioinformatics/btu817 ID - Hu2015 ER - TY - JOUR AU - Petersen, T. N. AU - Brunak, S. AU - Heijne, G. AU - Nielsen, H. PY - 2011 DA - 2011// TI - SignalP 4.0: discriminating signal peptides from transmembrane regions JO - Nat Methods VL - 8 UR - https://doi.org/10.1038/nmeth.1701 DO - 10.1038/nmeth.1701 ID - Petersen2011 ER - TY - JOUR AU - Krogh, A. AU - Larsson, B. AU - Heijne, G. AU - Sonnhammer, E. L. L. PY - 2001 DA - 2001// TI - Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes JO - J Mol Biol VL - 305 UR - https://doi.org/10.1006/jmbi.2000.4315 DO - 10.1006/jmbi.2000.4315 ID - Krogh2001 ER - TY - JOUR AU - Kall, L. AU - Krogh, A. AU - Sonnhammer, E. L. L. PY - 2007 DA - 2007// TI - Advantages of combined transmembrane topology and signal peptide prediction - the Phobius web server JO - Nucleic Acids Res VL - 35 UR - https://doi.org/10.1093/nar/gkm256 DO - 10.1093/nar/gkm256 ID - Kall2007 ER - TY - JOUR AU - Letunic, I. AU - Bork, P. PY - 2011 DA - 2011// TI - Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy JO - Nucleic Acids Res VL - 39 UR - https://doi.org/10.1093/nar/gkr201 DO - 10.1093/nar/gkr201 ID - Letunic2011 ER - TY - JOUR AU - Lehti-Shiu, M. D. AU - Zou, C. AU - Hanada, K. AU - Shiu, S. H. PY - 2009 DA - 2009// TI - Evolutionary history and stress regulation of plant receptor-like kinase/Pelle genes JO - Plant Physiol VL - 150 UR - https://doi.org/10.1104/pp.108.134353 DO - 10.1104/pp.108.134353 ID - Lehti-Shiu2009 ER - TY - JOUR AU - Lavin, M. AU - Herendeen, P. S. AU - Wojciechowski, M. F. PY - 2005 DA - 2005// TI - Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary JO - Syst Biol VL - 54 UR - https://doi.org/10.1080/10635150590947131 DO - 10.1080/10635150590947131 ID - Lavin2005 ER - TY - JOUR AU - Lynch, M. AU - Conery, J. S. PY - 2000 DA - 2000// TI - The evolutionary fate and consequences of duplicate genes JO - Science VL - 290 UR - https://doi.org/10.1126/science.290.5494.1151 DO - 10.1126/science.290.5494.1151 ID - Lynch2000 ER - TY - JOUR AU - Eisen, M. B. AU - Spellman, P. T. AU - Brown, P. O. AU - Botstein, D. PY - 1998 DA - 1998// TI - Cluster analysis and display of genome-wide expression patterns JO - Proc Natl Acad Sci U S A VL - 95 UR - https://doi.org/10.1073/pnas.95.25.14863 DO - 10.1073/pnas.95.25.14863 ID - Eisen1998 ER - TY - JOUR AU - Livak, K. J. AU - Schmittgen, T. D. PY - 2001 DA - 2001// TI - Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method JO - Methods VL - 25 UR - https://doi.org/10.1006/meth.2001.1262 DO - 10.1006/meth.2001.1262 ID - Livak2001 ER - TY - JOUR AU - Rousset, F. PY - 2008 DA - 2008// TI - GENEPOP ' 007: a complete re-implementation of the GENEPOP software for Windows and Linux JO - Mol Ecol Resour VL - 8 UR - https://doi.org/10.1111/j.1471-8286.2007.01931.x DO - 10.1111/j.1471-8286.2007.01931.x ID - Rousset2008 ER -