Table 5 Putative candidate genes for RPR and IVDMD in two different ploidy populations
Traits | Population ploidy | Bin | Interval (Mb) | Putative candidate gene Id | References | Biological pathway |
|---|---|---|---|---|---|---|
RPR | DH | 5.05 | 176–178 | GRMZM2G132706 | cellulose biosynthesis | |
RPR | haploid | 2.02 | 13–20 | GRMZM2G044884 | cellulose biosynthesis | |
| Â | Â | Â | Â | GRMZM2G120016 | ||
| Â | Â | Â | Â | GRMZM2G168474 | ||
| Â | Â | Â | Â | GRMZM2G162333 | [36] | biodegradation pathway of the cell wall |
| Â | Â | Â | Â | GRMZM2G114276 | [38] | affecting cell wall composition |
| Â | Â | Â | Â | GRMZM2G045398 | [37] | controlling the expression of cellulose synthase genes |
| Â | Â | Â | Â | GRMZM2G318408 | ||
| Â | Â | Â | Â | GRMZM2G476597 | [39] | lignin biosynthesis |
| Â | Â | Â | Â | GRMZM2G020500 | ||
IVDMD | DH | 8.04 | 120–121 | GRMZM2G042865 | cellulose biosynthesis | |
| Â | Â | Â | Â | GRMZM2G074631 | ||
| Â | Â | Â | Â | GRMZM2G179444 | [36] | biodegradation pathway of the cell wall |
IVDMD | haploid | 8.05 | 121–129 | GRMZM2G467497 | [40] | depositing lignin in the cell wall |
| Â | Â | Â | Â | GRMZM2G381129 | ||
| Â | Â | Â | Â | AC209819.3_FG005 | [43] | lignin biosynthesis |
| Â | Â | Â | Â | AC205471.4_FG008 | [41] | affecting cell wall composition |
| Â | Â | Â | Â | GRMZM2G117198 | [42] | lignin biosynthesis |
| Â | Â | Â | Â | GRMZM2G071339 | [36] | biodegradation pathway of the cell wall |