Transcriptomic, proteomic and metabolic changes in Arabidopsis thaliana leaves after the onset of illumination

BMC Plant Biology

Table 3 Classes of RNAs detected by RNA-seq

	Total	Protein coding	pre-tRNA	rRNA	snRNA	snoRNA	miRNA	Other RNA	Pseudogene	TE
Chr1-5	23,250	21,497/27206^a	0/631	2/4	13/13	18/71	66/177	339/394	368/924	947/3903
ATMG	126	121/122	2/21	3/3	0	0	0	0	0	0
ATCG	96	87/88	1/37	8/8	0	0	0	0	0	0
Total expressed genes	23472	21705/27416	3/689	13/15	13/13	18/71	66/177	339/394	368/924	947/3903

^a Numbers in denominator are the total gene number of each type of RNAs annotated in TAIR 10.0 database (http://www.arabidopsis.org/portals/genAnnotation/genome_snapshot.jsp)

ISSN: 1471-2229