Repeat class | Number of sequences in rpt library | Estimated abundance in genome (%) | |
---|---|---|---|
Class I | LTR-RT (all) | 442 | 14.96 |
Ty1-copia | 169 | 2.67 | |
Ty3-gypsy | 236 | 11.40 | |
Unclassified LTR-RT | 37 | 0.89 | |
Non-LTR retroelements | 25 | 0.12 | |
SINEs | 7 | 0.18 | |
Class II | DNA TE (including MITEs) | 127 | 2.33 |
 | Other TEs | 14 | 0.89 |
 | Satellite | 3 | 4.54 |
 | Uncharacterized | 771 | 4.44 |
 | Total | 1389 | 27.46 |