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Table 3 RNA-Seq data overview

From: Shared and divergent pathways for flower abscission are triggered by gibberellic acid and carbon starvation in seedless Vitis vinifera L

 

Raw read pairs (x1000)

Remaining reads after trimming (%)

Mapped reads (%)

C5d

36342 ± 5193

91.1 ± 2.5

76.9 ± 0.7

C7d

24725 ± 603

92.1 ± 0.8

76.1 ± 0.7

GAc5d

23705 ± 1936

93.2 ± 0.8

77.9 ± 2.2

GAc7d

20957 ± 1580

91.1 ± 1.3

76.0 ± 0.7

SH5d

26103 ± 1920

92.4 ± 1.0

80.0 ± 5.5

SH7d

30549 ± 1242

92.2 ± 1.6

74.1 ± 1.0

  1. Reads number obtained in each treatment, percentage of reads after data trimming and of successfully mapped reads after rRNA contamination removal (mean of three independent biological replicates ± standard error (se))