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Table 11 List of DEG simultaneous affected by GAc and shade treatments

From: Shared and divergent pathways for flower abscission are triggered by gibberellic acid and carbon starvation in seedless Vitis vinifera L

Gene ID

GAc5d

GAc7d

SH5d

SH7d

Annotation

UniprotKB

NCBI

Functional category

VIT_14s0066g01960

1.71

1.77

 

3.51

metalloendoproteinase 1, predicted

F6HV36

 

Amino acid transport and metabolism

VIT_14s0060g00740

 

1.81

 

1.80

glycosyl transferase, family 8 - glycogenin, predicted

D7UA70

 

Carbohydrate transport and metabolism

VIT_07s0129g00790

 

2.02

1.77

 

ribulose-1,5-bisphosphate carboxylase /oxygenase subunit

F6HSX2

 

VIT_01s0026g00630

 

1.65

−1.99

−2.71

UDP-glycosyltransferase 74B1, predicted

F6HPK7

XM_002267629.2

VIT_06s0004g02710

 

1.60

−2.64

−3.46

glucose-6-phosphate/phosphate antiporter, predicted

D7SKZ8

XM_002285193.2

VIT_15s0046g01600

 

2.11

 

2.77

acidic endochitinase, predicted

F6I685

XM_002279522.2

Cell wall/membrane/envelope biogenesis

VIT_18s0001g06580

 

1.60

−3.04

−3.11

blue copper protein-like, predicted

F6H0Y2

XM_002285700.3

Coenzyme transport and metabolism

VIT_00s0733g00010

 

1.83

2.60

 

ATPase subunit 1 (mitochondrion)

F6I2F8

 

Energy production and conversion

VIT_00s0332g00170

 

1.78

2.04

 

NADH:ubiquinone oxidoreductase, NDUFS2/49 k subunit (mitochondrion), predicted

F6HSD9

 

VIT_08s0056g01060

 

2.25

2.29

 

NADH dehydrogenase subunit 1 (chloroplast)

F6HMW4

 

VIT_14s0108g01640

1.64

2.27

2.56

 

NADH-plastoquinone oxidoreductase subunit 2 (chloroplast)

F6H5N4

 

VIT_13s0067g03310

 

2.15

1.67

 

ATPase subunit, predicted

F6HC65

 

VIT_01s0011g04110

 

1.75

2.22

2.39

NADH dehydrogenase subunits 2, 5, predicted

F6HEV2

 

VIT_00s0246g00050

 

1.93

2.32

2.17

NADH dehydrogenase subunits 2, 5, predicted

D7TKT1

 

VIT_00s0332g00140

 

1.61

1.70

 

NADH:ubiquinone oxidoreductase, NDUFS2/49 kDa subunit, predicted

D7TSH3

 

VIT_00s0246g00070

 

1.96

 

2.22

NADH:ubiquinone oxidoreductase, NDUFS2/49 kDa subunit, predicted

F6HMJ6

 

VIT_10s0116g00060

 

2.04

2.18

 

NADH:ubiquinone oxidoreductase, NDUFS2/49 kDa subunit, predicted

E0CVJ6

 

VIT_10s0092g00770

1.68

2.27

2.79

 

cytochrome c biogenesis C (mitochondrion)

F6I3K0

XM_010657573.1

VIT_03s0110g00360

 

−2.04

 

−1.88

copper transporter 6-like, predicted

A5AQX0

XM_003631673.2

Inorganic ion transport and metabolism

VIT_18s0072g00740

 

−1.55

−1.68

−1.75

sec5 subunit of exocyst complex, predicted

F6GY22

 

Intracellular traff., secretion, vesicular trans.

VIT_07s0031g00570

 

1.66

 

3.41

lipase, predicted

D7SVX1

 

Lipid transport and metabolism

VIT_18s0001g10330

 

−1.60

 

−4.02

subtilisin-like protease

F6H1C2

 

Posttranslational mod., protein turn., chap.

VIT_00s0332g00010

 

1.81

2.13

 

mitochondrial mRNA maturase

F6HSC8

 

RNA processing and modification

VIT_00s0332g00030

1.57

1.83

2.23

 

mitochondrial mRNA maturase, predicted

F6HSD0

 

VIT_08s0007g01910

 

1.90

−3.05

−4.22

laccase-4, predicted

D7THA7

XM_002278602.3

Secondary metabolites biosynthesis, transport and catabolism

VIT_17s0000g01490

 

−1.81

−1.88

−2.05

cytochrome P450 94A1-like, predicted

F6GST7

XM_002279945.2

VIT_02s0012g00820

 

2.60

2.08

 

serine/threonine protein kinase, predicted

F6HTC0

 

Signal transduction mechanisms

VIT_02s0012g00720

 

2.65

2.14

 

serine/threonine protein kinase, predicted

D7TTF6

  

VIT_12s0028g02570

 

1.80

2.60

3.46

calmodulin and related proteins (EF-Hand superfamily), predicted

E0CTM8

XM_002279084.2

 

VIT_08s0056g00900

1.76

1.87

2.03

2.12

RNA polymerase II, second largest subunit, predicted

F6HMV9

 

Transcripton

VIT_14s0108g01010

−1.50

−1.90

−1.63

−2.47

transcription factor, Myb superfamily, predicted

F6H5U7

  

VIT_09s0002g04540

1.81

2.02

1.96

 

DNA-directed RNA polymerase subunit beta

D7U0K0

  

VIT_15s0024g01960

 

2.39

2.28

 

RNA polymerase III, large subunit, predicted

D7UBC3

  

VIT_05s0077g01860

 

−1.56

 

1.68

ethylene-responsive transcription factor RAP2-3, predicted

D7SYA3

XM_002272390.2

 

VIT_00s0173g00170

 

2.10

1.74

2.33

30S ribosomal protein S7, chloroplastic, predicted

F6HD03

 

Translation

VIT_10s0092g00790

 

2.04

2.42

 

ribosomal protein S19, mitochondrial-like, predicted

D7U8H6

 

VIT_02s0033g00990

 

2.55

2.71

 

ribosomal protein S7 (chloroplast)

F6I086

 

VIT_16s0039g00380

 

1.77

1.85

 

mitochondrial/chloroplast ribosomal protein S14/S29, predicted

F6GZ45

 

VIT_12s0028g00970

 

2.20

1.80

2.33

ribosomal protein S7, predicted

F6HRD9

 

VIT_09s0070g00900

 

1.87

1.92

2.37

ribosomal protein S7, predicted

D7U8C4

 

VIT_09s0070g00920

 

1.79

1.84

2.41

ribosomal protein S7, predicted

D7U8C4

 

VIT_13s0047g00220

 

2.12

2.60

 

mitochondrial/chloroplast ribosomal protein S19, predicted

D7TF26

 

VIT_02s0033g00980

 

2.79

2.88

 

ribosomal protein S7, predicted

F6I085

 

VIT_00s0396g00050

 

1.81

2.67

 

ribosomal protein S4 (mitochondrion)

F6HRU1

XM_010648649.1

VIT_05s0020g00600

 

1.66

 

1.91

1-cys peroxiredoxin

D7T674

NM_001281268.1

Other

  1. Gene code identification, fold-change, annotation, UniProtKB accession number and KOG functional category are reported. Data were obtained from 3 independent biological replicates. Bold letters indicate the metabolites showing opposite trend in both treatments