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Table 3 List of SNPs significantly associated with seedling resistance to race TRTTF

From: Erratum to: Association mapping of North American spring wheat breeding germplasm reveals loci conferring resistance to Ug99 and other African stem rust races

SNP

Chra

Pos (cM)

P value

R2 (%)b

IWB843

0

0.0

1.43E-04

15.4

IWB8113

0

0.0

8.36E-04

13.2

IWB9699

0

0.0

8.36E-04

12.9

IWB25143

0

0.0

4.62E-07

10.8

IWB27028

0

0.0

5.95E-04

10.7

IWB48121

0

0.0

1.83E-04

7.7

IWB64530

0

0.0

8.36E-04

7.6

IWB67724

0

0.0

2.26E-04

6.1

IWB68822

0

0.0

8.36E-04

4.2

IWB9794

1B

43.9

6.06E-04

4.2

IWB72495

1B

53.3

6.06E-04

4.1

IWB11356

1B

62.4

5.66E-04

4.0

IWB11357

1B

62.4

5.66E-04

3.4

IWB60559

1B

62.4

6.06E-04

3.2

IWB65404

1B

62.4

4.44E-04

3.2

IWB11819

1B

62.6

6.06E-04

3.2

IWB11820

1B

62.6

4.44E-04

3.2

IWB34561

1B

62.6

6.06E-04

3.6

IWB47684

1B

62.6

7.00E-04

3.6

IWB53143

1B

62.6

9.38E-04

3.5

IWB6592

1B

62.6

6.06E-04

3.5

IWB41306

1B

64.9

6.06E-04

3.4

IWB44021

1D

8.7

5.95E-04

3.4

IWA8551

1D

50.6

7.02E-04

3.4

IWB24961

5D

200.3

3.70E-04

3.4

IWB57210

5D

200.3

3.70E-04

3.4

IWB12448

6A

1.9

4.82E-04

3.4

IWB33595

6A

3.4

1.14E-04

3.4

IWB11274

6A

4.7

3.93E-08

3.3

IWB53755

6A

4.7

1.25E-04

3.2

IWA5416

6A

5.6

2.81E-09

3.4

IWA5781

6A

5.7

3.17E-09

3.3

IWB7601

6A

6.4

1.85E-05

3.7

IWB47842

6A

7.0

1.31E-04

3.7

IWA3856

6A

12.5

1.85E-05

28.6

IWA6871

6A

12.5

1.85E-05

27.2

IWB23520

6A

12.5

1.85E-05

25.7

IWB2392

6A

12.5

6.41E-12

25.7

IWB26415

6A

12.5

1.85E-05

24.7

IWB43804

6A

12.5

1.85E-05

24.7

IWB9075

6A

12.5

3.00E-06

24.6

IWA7006

6A

12.8

2.06E-05

24.3

IWB22036

6A

12.9

4.64E-20

20.2

IWB10105

6A

13.5

5.80E-10

16.4

IWB11315

6A

13.5

7.37E-18

15.4

IWB23521

6A

13.5

5.98E-13

15.4

IWB26414

6A

13.5

6.11E-12

15.4

IWB35219

6A

13.5

1.18E-17

15.4

IWB43805

6A

13.5

1.98E-18

14.8

IWB43810

6A

13.5

1.85E-05

14.8

IWB58271

6A

13.5

2.78E-19

14.8

IWB60233

6A

13.5

6.11E-12

14.8

IWB6358

6A

13.5

1.85E-05

12.5

IWB66015

6A

13.5

6.11E-12

12.5

IWB67413

6A

13.5

7.37E-18

12.5

IWB67415

6A

13.5

8.35E-18

12.4

IWB72957

6A

13.5

1.98E-18

12.4

IWA272

6A

15.7

1.50E-04

12.4

IWB64917

6A

15.7

3.29E-04

11.9

IWB5029

6A

16.0

2.84E-15

11.8

IWB35595

6A

16.6

2.57E-12

10.0

IWB43808

6A

16.6

2.57E-12

9.1

IWB64918

6A

16.6

2.57E-12

7.6

IWB72956

6A

16.6

2.57E-12

6.5

IWA7913

6A

17.0

2.57E-12

6.1

IWB23519

6A

17.0

5.44E-10

6.0

IWA705

6A

20.0

5.56E-06

6.0

IWA4962

6A

21.1

4.26E-07

5.4

IWB31479

6A

21.1

4.72E-07

5.4

IWB48751

6A

21.1

1.01E-08

5.4

IWB20143

6A

22.0

2.44E-10

5.4

IWA4551

6A

22.9

6.94E-11

5.4

IWA4552

6A

22.9

1.11E-10

5.4

IWB22191

6A

22.9

6.67E-06

5.4

IWB28421

6A

22.9

2.44E-10

5.4

IWB50019

6A

22.9

2.44E-10

5.3

IWB28338

6A

23.0

6.67E-06

4.8

IWB1550

6A

25.5

2.19E-10

4.4

IWB22216

6A

25.5

5.42E-05

4.3

IWB30507

6A

25.5

2.19E-10

4.3

IWB40111

6A

25.5

5.36E-06

3.8

IWB52325

6A

25.5

2.06E-10

3.5

IWB64084.2

6B

9.8

3.68E-05

5.3

IWB11653.2

6B

14.5

2.10E-05

5.0

IWB14901

7A

124.3

2.72E-04

3.9

IWB48466

7A

217.0

8.24E-04

3.2

  1. aChr ‘0’ indicates unmapped SNPs that were significant in the analysis
  2. bR2 Indicates the percent of phenotypic variation explained by the significant locus