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Table 2 qRT-PCR validations of 12 randomly selected genes from the differentially expressed genes in the RNA-seq results

From: JMJ704 positively regulates rice defense response against Xanthomonas oryzae pv. oryzae infection via reducing H3K4me2/3 associated with negative disease resistance regulators

Gene ID Gene annotation Ratio in RNA-seq (before inoculation) Fold-change in qRT-PCR (before inoculation) Fold-change in qRT-PCR (24 h after inoculation)
LOC_Os01g03940 Negative regulator of disease resistance , expressed protein 4.02 4.36 5.39
LOC_Os01g12160 OsGH3.3-Probable indole-3-acetic acid-amido synthetase, expressed 3.90 3.06 4.64
LOC_Os01g36070 nodulin MtN3 family protein, putative, expressed 4.93 3.30 1.23
LOC_Os02g39660 receptor kinase, putative, expressed 0.003 0.09 0.25
LOC_Os02g40784 WAX2, putative, expressed 0.50 0.45 0.28
LOC_Os05g25770 Superfamily of TFs having WRKY and zinc finger domains, expressed 15.34 10.94 3.6
LOC_Os06g38830 receptor-like protein kinase precursor, putative, expressed 0.11 0.25 0.73
LOC_Os09g25070 OsWRKY62 - Superfamily of TFs having WRKY and zinc finger domains, expressed 22.75 8.89 6.43
LOC_Os11g12050 NBS-LRR type disease resistance protein, putative, expressed 0.17 0.37 0.62
LOC_Os11g12320 disease resistance protein RPM1, putative 0.026 0.35 0.81
LOC_Os11g31190 nodulin MtN3 family protein, putative, expressed 2.78 6.48 8.01
LOC_Os12g36880 pathogenesis-related Bet v I family protein, putative, expressed 3.13 2.14 0.77
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