Skip to main content

Table 2 Four different transcript regulation patterns in drought stress response

From: Global analysis of uncapped mRNA changes under drought stress and microRNA-dependent endonucleolytic cleavages in foxtail millet

Type

Gene number

Change after PEG-treatment

I

671

D↑R↑

453

D↓R↓

II

260

D↑R-

63

D↓R-

III

2

D↑R↓

0

D↓R↑

IV

466

D-R↑

781

D-R↓

  1. D: uncapped mRNA abundance indicated by parallel analysis of RNA end tags; R: transcript abundance indicated by RNA-Seq reads. Genes with log2 (fold change) ≥ 1 and a P-value < 0.001 were considered as up regulated genes and genes with log2 (fold change) ≤ − 1 and a P-value < 0.001 were considered as down regulated genes. Genes with −1 < log2 (fold change) < 1 and a P-value > 0.001 were designated as unchanged