Skip to main content

Table 1 Terpenoid pathway transcripts

From: Using the combined analysis of transcripts and metabolites to propose key genes for differential terpene accumulation across two regions

Encoded protein description Cluster RefSeq accession(s)
3-hydroxy-3-methylglutaryl-coenzyme A reductase(HMGR) Decreased XM_002265602.1,XM_002275791.2
  Stable expression XM_002283147.2
Farnesyl pyrophosphate synthase(FPPS) Decreased XM_002272605.1
TPS-a (sesquiterpene synthase, 20) NC XM_002275022.1,XM_002275315.1,XM_002282452.1,XM_002283308.1,HM807375.1,XM_003635502.1,NM_001281075.1,NM_001281086.1,NM_001281099.1,NM_001281272.1
  Decreased(young berry) HM807374.1(NM_001281275.1),XM_002263544.2,NM_001281284.1,JF808010.1
  Increased(ripe berry) XM_002283034.1, HM807380.1, NM_001281095.1,NM_001281134.1,NM_001281043.1, NM_001281286.1
1-deoxy-D-xylulose-5-phosphate synthase(DXS) Stable expression XM_002277883.2
1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like   XM_002271746.2,XM_002271549.1,XM_002282392.2,XM_002266889.2
1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR) Stable expression XM_002282725.1
4-hydroxy-3-methylbut-2-enyldiphosphate reductase (HDR) Increased XM_002284623.2
geranyl diphosphate synthase (GPPS) Stable expression XM_002268193.2
TPS-b (monoterpene synthase, 25) NC XM_002266772.1,XM_002267425.2,XM_003634831.1,HM807387.1,HM807388.1,AY572986.1,AY572987.1,NM_001281254.1
  Decreased(young berry) XM_002275070.2,XM_002267417.1,XM_003634850.1,HM807382.1,HM807383.1,NM_001281170.1,NM_001281238.1,NM_001281080.1
  Increased(ripe berry) NM_001281016.1(HM807386.1)
  ND XM_002267123.1,XM_003634833.1,XM_003634834.1,XM_003634835.1,XM_003634837.1,XM_002266983.2,XM_003634854.1
  Different expression NM_001281259.1(HM807385)
TPS-g (monoterpene synthase, 21) Decreased(young berry) HQ326231.1,HM807392.1,HM807393.1,HM807394.1,XM_003635234.2
NC HM807395.1,HM807396.1,HM807397.1,HM807398.1,HM807399.1,XM_003635120.2, XM_003635365.2
  Increased(ripe berry) HM807391.1,XM_003635129.2,XM_003635343.1
  ND XM_003633271.1,XM_003635121.1,XM_003635122.1,XM_002270071.2,XM_003635233.1,XM_003635244.1
  1. NC expressed at a certain stage but not clustered in heatmap, ND, not included in the current NCBI RefSeq mRNA database