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Table 4 GO terms associated with upregulated DEGs in the root tips that were enriched (FDR ≤ 0.05) in at least one of the genotypes and used to select candidate genes with putative functions in drought responses in willows

From: Genome-wide transcriptional and physiological responses to drought stress in leaves and roots of two willow genotypes

GO-ID Term FDR No of genes in test set No of genes in ref set
   Genotype 592/520 Genotype 592/520 Genotype 592/520
GO:0009628 Response to abiotic stimulus 7.9 × 10−3/1.8 × 10−3 106/114 1004/996
GO:0009644 Response to high light intensity 2.4 × 10−2/2.6 × 10−2 15/15 73/73
GO:0009642 Response to light intensity 4.9 × 10−3/5.7 × 10−3 19/19 90/90
GO:0009636 Response to toxic substance 3.5 × 10−2/- 5/- 8/-
GO:0009415 Response to water 4.9 × 10−2/- 17/- 96/-
GO:0042538 Hyperosmotic salinity response -/3.2 × 10−2 -/9 -/31
GO:0098542 Defense response to other organism -/9.3 × 10−3 -/47 -/342
GO:0009637 Response to blue light -/1.8 × 10−5 -/19 -/51
GO:0010218 Response to far red light -/1.1 × 10−4 -/15 -/37
GO:0009416 Response to light stimulus -/1.4 × 10−2 -/55 -/432
GO:0009314 Response to radiation -/2.6 × 10−2 -/57 -/466
GO:0010114 Response to red light -/5.1 × 10−5 -/14 -/29
GO:0051788 Response to misfolded protein -/3.4 × 10−2 -/0 -/93
GO:0002679 Respiratory burst involved in defense response 2.5 × 10−2/- 7/- 19/-
GO:0006974 Cellular response to DNA damage stimulus 4.9 × 10−2/1.9 × 10−2 6/6 256/256