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Table 1 Putative cis-elements in the Glyma11g13220 promoter

From: Glyma11g13220, a homolog of the vernalization pathway gene VERNALIZATION 1 from soybean [Glycine max (L.) Merr.], promotes flowering in Arabidopsis thaliana

cis-element

Position (From ATG)

Sequence (5′-3′)

Light regulation elements

 3-AF1 binding site

−1444(+)

ATGAGATATTT

 ACE

−1387(−)

CAAACGTATT

 AT1-motif

−511(+)

AATTATTATTTATT

 Box 4

−126(+),−560(+),−615(+),−752(+),−1183(+)

ATTAAT

 Box I

−390(+),−1363(+)

TTTCAAA

 G-Box

−156(+)

TACGTG

 I-box

−841(−)

GTAAAAGGCC

 LAMP-element

−63(+)

CTTTATCA

 chs-CMA1a

−1452(−)

TTACTTAA

Tissue-specific and development-related elements

 GCN4_motif

−1023(+)

TGAGTCA

 Skn-1_motif

−230(+),-1020(+),−1111(+)

GTCAT

 Circadian

−1220(+)

AAAAGATATC

 GARE-motif

−880(−)

AAACAGA

 TCA

−199(−)

GAGAATAATA

 ABRE

−156(+)

TACGTG

Abiotic stress response elements

 MBS

−1081(−),−649(+)

(C/T)AACTG

 HSE

−1307(−),−628(+)

A(A/G)AAAATTT(A/G)

 DRE

−170(+)

TACCGACAT

 TC-rich repeats

−1230(+)

ATTTTCTTAA