BMC Plant Biology

Table 2 Length distribution of the transcripts and unigenes clustered from the de novo assembly

From: A transcriptomic analysis of bermudagrass (Cynodon dactylon) provides novel insights into the basis of low temperature tolerance

Category	Transcript	Unigene
200-500 bp	116004	79038
500-1kbp	61896	20515
1 k-2kbp	77618	11918
>2kbp	70917	9695
N50	2114	1276
N90	567	269
Total	326435	121166
Max length	20202	20202
Min length	201	201
Average length	1277	706

Note: The N50 size is computed by sorting all transcripts from largest to smallest and by determining the minimum set of transcripts whose sizes total 50 % of the entire transcript and unigene was the same; N90 was counted in the similar way

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ISSN: 1471-2229

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